RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 COL9A3Q14050 684 aaPredicted RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 UGCGQ16739 394 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 PRR16Q569H4 304 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 KIAA0319Q5VV43 1072 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 SPATA31D4Q6ZUB0 917 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 TEX2Q8IWB9 1127 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 MAML2Q8IZL2 1156 aaPredicted RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 FAM193BQ96PV7 902 aaPredicted RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 FDXACB1Q9BRP7 624 aaPredicted RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 GLT8D2Q9H1C3 349 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 PIDD1Q9HB75 910 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 SLC2A4RGQ9NR83 387 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 DPP7Q9UHL4 492 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 PRG3Q9Y2Y8 225 aaPredicted RBP9.63□□□□□ -0.87
SDF2-204ENST00000587338 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
SDF2-204ENST00000587338 ANKRD11Q6UB99 2663 aaPredicted RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SGSM2O43147 1006 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 CHMP2AO43633 222 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 DDHD2O94830 711 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SEC24BO95487 1268 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SOD2P04179 222 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 CYP3A4P08684 503 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 LAMP2P13473 410 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 GLUD2P49448 558 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 LMNB2Q03252 620 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 CSTF1Q05048 431 aaKnown RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 UBXN2BQ14CS0 331 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 MTERF2Q49AM1 385 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 CYP26C1Q6V0L0 522 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SYNE3Q6ZMZ3 975 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 CATSPER4Q7RTX7 472 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 PHKBQ93100 1093 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 ZNF707Q96C28 371 aaPredicted RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 PGBD4Q96DM1 585 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SHDQ96IW2 340 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 RPS6KC1Q96S38 1066 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 HERC2P3Q9BVR0 1158 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 BCO2Q9BYV7 579 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 DISC1Q9NRI5 854 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.62□□□□□ -0.874e-6■□□□□ 9
SDF2-204ENST00000587338 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 USP18Q9UMW8 372 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 V9GY48 417 aaPredicted RBP9.62□□□□□ -0.87
SDF2-204ENST00000587338 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
SDF2-204ENST00000587338 FAM208BQ5VWN6 2430 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 PRR5-ARHGAP8B1AHC4 643 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 ANHXE9PGG2 379 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 NRP1O14786 923 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 EIF5BO60841 1220 aaKnown RBP9.61□□□□□ -0.87
SDF2-204ENST00000587338 ZNF623O75123 536 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 POMCP01189 267 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 ALDH2P05091 517 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 DNM2P50570 870 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 STARD6P59095 220 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 GPC5P78333 572 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 ARHGAP8P85298 464 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 SNW1Q13573 536 aaKnown RBP9.61□□□□□ -0.87
SDF2-204ENST00000587338 RTN1Q16799 776 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 ZNF528Q3MIS6 628 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 APOA5Q6Q788 366 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 AGMOQ6ZNB7 445 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 TAS1R1Q7RTX1 841 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 PALB2Q86YC2 1186 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 RHPN2Q8IUC4 686 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 GLYCTKQ8IVS8 523 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 CRYGNQ8WXF5 182 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 NLRP4Q96MN2 994 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 SH2D3AQ9BRG2 576 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 TMEM175Q9BSA9 504 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 INO80BQ9C086 356 aaPredicted RBP9.61□□□□□ -0.87
SDF2-204ENST00000587338 RSAD1Q9HA92 442 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 RBM28Q9NW13 759 aaKnown RBP9.61□□□□□ -0.87
SDF2-204ENST00000587338 FBXO4Q9UKT5 387 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 SSX2IPQ9Y2D8 614 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 PCDHGA2Q9Y5H1 932 aa9.61□□□□□ -0.87
SDF2-204ENST00000587338 CNTNAP2Q9UHC6 1331 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 KANSL1LA0AUZ9 987 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 GAS7O60861 476 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 OR1G1P47890 313 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 CDC42EP1Q00587 391 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 FUT2Q10981 343 aa9.6□□□□□ -0.87
SDF2-204ENST00000587338 TARBP2Q15633 366 aaKnown RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 MLF2Q15773 248 aaPredicted RBP9.6□□□□□ -0.87
SDF2-204ENST00000587338 ZNF410Q86VK4 478 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms