RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 KMT5BQ4FZB7 885 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 SLC17A8Q8NDX2 589 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 SPATA20Q8TB22 786 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 HERVK_113Q902F9 699 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 HPS3Q969F9 1004 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 FTHL17Q9BXU8 183 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 FGFBP2Q9BYJ0 223 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 CHST12Q9NRB3 414 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 TBC1D7Q9P0N9 293 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 GBF1Q92538 1859 aa16.63■□□□□ 0.25
MKS1-210ENST00000581180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 DENND3A2RUS2 1198 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 TTLL13PA6NNM8 815 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 B4GALT5O43286 388 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 RPN1P04843 607 aaKnown RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 ACTN1P12814 892 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 ARF4P18085 180 aaPredicted RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 SCP2P22307 547 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 CASP5P51878 434 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 IKBKEQ14164 716 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 UBE2OQ9C0C9 1292 aaKnown RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 MRPL44Q9H9J2 332 aaKnown RBP16.62■□□□□ 0.25
MKS1-210ENST00000581180 CNTNAP2Q9UHC6 1331 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 CITO14578 2027 aa16.62■□□□□ 0.25
MKS1-210ENST00000581180 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 ENPP3O14638 875 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 EFCAB14O75071 495 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 ERLIN2O94905 339 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 RHOBTB3O94955 611 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 AXLP30530 894 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 KCNB1Q14721 858 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 SHHQ15465 462 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 ZC2HC1CQ53FD0 456 aaPredicted RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 FAM26FQ5R3K3 315 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 EPM2AIP1Q7L775 607 aaPredicted RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 HVCN1Q96D96 273 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 ADAM2Q99965 735 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 CXXC1Q9P0U4 656 aaPredicted RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 PIN4Q9Y237 131 aaKnown RBP16.61■□□□□ 0.25
MKS1-210ENST00000581180 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
MKS1-210ENST00000581180 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 MBD3O95983 291 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 MYBP10242 640 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 ABCD1P33897 745 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 WDR5P61964 334 aaKnown RBP16.6■□□□□ 0.25
MKS1-210ENST00000581180 PRPF4BQ13523 1007 aaKnown RBP16.6■□□□□ 0.25
MKS1-210ENST00000581180 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
MKS1-210ENST00000581180 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 ACO2Q99798 780 aaKnown RBP16.6■□□□□ 0.25
MKS1-210ENST00000581180 TRAIPQ9BWF2 469 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
MKS1-210ENST00000581180 C9IYK1 514 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 GCNT3O95395 438 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 PIGRP01833 764 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
MKS1-210ENST00000581180 FAM189BP81408 668 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 STK4Q13043 487 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 PSMD2Q13200 908 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 ALCAMQ13740 583 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
MKS1-210ENST00000581180 NOTUMQ6P988 496 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 MAP4K3Q8IVH8 894 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 CRIPAKQ8N1N5 446 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 KIAA0895Q8NCT3 520 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 GSDMAQ96QA5 445 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 TARS2Q9BW92 718 aaKnown RBP16.59■□□□□ 0.25
MKS1-210ENST00000581180 MRPL4Q9BYD3 311 aaKnown RBP16.59■□□□□ 0.25
MKS1-210ENST00000581180 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 PTPRHQ9HD43 1115 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 SLC39A2Q9NP94 309 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 C1orf112Q9NSG2 853 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
MKS1-210ENST00000581180 RANBP2P49792 3224 aaKnown RBP16.58■□□□□ 0.25
MKS1-210ENST00000581180 ABLIM1O14639 778 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
MKS1-210ENST00000581180 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
MKS1-210ENST00000581180 SMC2O95347 1197 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 PROZP22891 400 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 HOXD13P35453 343 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 DEFB103AP81534 67 aa16.58■□□□□ 0.24
MKS1-210ENST00000581180 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
MKS1-210ENST00000581180 KCNA1Q09470 495 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms