RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PHLPP2Q6ZVD8 1323 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 DENND3A2RUS2 1198 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 K7ENM7 598 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 K7ERI5 159 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 B4GALT5O43286 388 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 TSPAN1O60635 241 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 GCNT3O95395 438 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 FGBP02675 491 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 PRKCBP05771 671 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 PFKMP08237 780 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 MYBP10242 640 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 SFPQP23246 707 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP88-211ENST00000575976 CASP5P51878 434 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 EFNA5P52803 228 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 MAPK6Q16659 721 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 FAM187BQ17R55 369 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 ZC2HC1CQ53FD0 456 aaPredicted RBP9.43□□□□□ -0.9
NUP88-211ENST00000575976 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 TMEM240Q5SV17 173 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 CNKSR3Q6P9H4 555 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 CATSPER4Q7RTX7 472 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 ZNF720Q7Z2F6 126 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
NUP88-211ENST00000575976 GLIS3Q8NEA6 775 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 APBB2Q92870 758 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP88-211ENST00000575976 FGFBP2Q9BYJ0 223 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 CLSTN2Q9H4D0 955 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 ST6GALNAC4Q9H4F1 302 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 MRPL44Q9H9J2 332 aaKnown RBP9.43□□□□□ -0.9
NUP88-211ENST00000575976 OLFML3Q9NRN5 406 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 PRMT7Q9NVM4 692 aaPredicted RBP9.43□□□□□ -0.9
NUP88-211ENST00000575976 HOOK1Q9UJC3 728 aaKnown RBP9.43□□□□□ -0.9
NUP88-211ENST00000575976 PCDHA5Q9Y5H7 936 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 H0YCG3 227 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 ACKR2O00590 384 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 MGEA5O60502 916 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 PPP1R37O75864 691 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 ERLIN2O94905 339 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 PRPF6O94906 941 aaKnown RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 RHOBTB3O94955 611 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 MBD3O95983 291 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 ARF4P18085 180 aaPredicted RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 COL9A1P20849 921 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 HOXD11P31277 338 aaPredicted RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 SARSP49591 514 aaKnown RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 GTF2BQ00403 316 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 STK4Q13043 487 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 DSC3Q14574 896 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 KCNB1Q14721 858 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 NT5DC1Q5TFE4 455 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 FAM109BQ6ICB4 259 aaPredicted RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 OTOP2Q7RTS6 562 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 SPATA20Q8TB22 786 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 LINC01599Q8WXQ3 324 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 KCNN1Q92952 543 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 SMARCE1Q969G3 411 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 CCDC47Q96A33 483 aaKnown RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 CPB2Q96IY4 423 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 STRA6Q9BX79 667 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 NUP62CLQ9H1M0 184 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 AGPAT5Q9NUQ2 364 aa9.42□□□□□ -0.9
NUP88-211ENST00000575976 PIN4Q9Y237 131 aaKnown RBP9.42□□□□□ -0.9
NUP88-211ENST00000575976 ABHD14A-ACY1A0A1B0GW23 586 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 ENPP3O14638 875 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 SMC2O95347 1197 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 ACTN1P12814 892 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 AXLP30530 894 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 NCBP1Q09161 790 aaKnown RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 KCNA1Q09470 495 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 STRN3Q13033 797 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 PSMD2Q13200 908 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 PRPF4BQ13523 1007 aaKnown RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 IKBKEQ14164 716 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 PCBP1Q15365 356 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP88-211ENST00000575976 SHHQ15465 462 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 C9orf50Q5SZB4 431 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 L1TD1Q5T7N2 865 aaKnown RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 PSRC1Q6PGN9 363 aaPredicted RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP88-211ENST00000575976 EPM2AIP1Q7L775 607 aaPredicted RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 CDR2LQ86X02 465 aaPredicted RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 KIAA0895Q8NCT3 520 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 ZNF507Q8TCN5 953 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 HVCN1Q96D96 273 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 PRIMPOLQ96LW4 560 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 GSDMAQ96QA5 445 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 ACO2Q99798 780 aaKnown RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 ADAM2Q99965 735 aa9.41□□□□□ -0.9
NUP88-211ENST00000575976 TARS2Q9BW92 718 aaKnown RBP9.41□□□□□ -0.9
NUP88-211ENST00000575976 FTHL17Q9BXU8 183 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms