RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 FUT2Q10981 343 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 CMASQ8NFW8 434 aaPredicted RBP13.71□□□□□ -0.21
PRPF8-208ENST00000573716 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
PRPF8-208ENST00000573716 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
PRPF8-208ENST00000573716 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
PRPF8-208ENST00000573716 NRP1O14786 923 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 TEX28O15482 410 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 LILRB3O75022 631 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 LRRN2O75325 713 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 OR1G1P47890 313 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 AFF1P51825 1210 aaKnown RBP13.7□□□□□ -0.22
PRPF8-208ENST00000573716 CDC42EP1Q00587 391 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 AGMOQ6ZNB7 445 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 PJA1Q8NG27 643 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 GJA10Q969M2 543 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 NXPE3Q969Y0 559 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 RPS6KC1Q96S38 1066 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 LSG1Q9H089 658 aaKnown RBP13.7□□□□□ -0.22
PRPF8-208ENST00000573716 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 SPATA6Q9NWH7 488 aaPredicted RBP13.7□□□□□ -0.22
PRPF8-208ENST00000573716 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
PRPF8-208ENST00000573716 MYH15Q9Y2K3 1946 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 KLF18A0A0U1RQI7 1052 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 DDX11L8A8MPP1 907 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 SOD2P04179 222 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 LAMP2P13473 410 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 GLUD2P49448 558 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 JAK3P52333 1124 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 MIER3Q7Z3K6 550 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 SUMF1Q8NBK3 374 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 PHKBQ93100 1093 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 NUMBLQ9Y6R0 609 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 ACACBO00763 2458 aa13.69□□□□□ -0.22
PRPF8-208ENST00000573716 KMT2BQ9UMN6 2715 aaPredicted RBP13.69□□□□□ -0.22
PRPF8-208ENST00000573716 GPR179Q6PRD1 2367 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 MSH4O15457 936 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 ZNF623O75123 536 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 GLULP15104 373 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 CDC27P30260 824 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 SFNP31947 248 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 CSTF1Q05048 431 aaKnown RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 HTR4Q13639 388 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 UBXN2BQ14CS0 331 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 TARBP2Q15633 366 aaKnown RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 LENG9Q96B70 501 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 SHDQ96IW2 340 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 DNAH14Q0VDD8 3507 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
PRPF8-208ENST00000573716 MTCL1Q9Y4B5 1905 aaKnown RBP13.68□□□□□ -0.22
PRPF8-208ENST00000573716 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
PRPF8-208ENST00000573716 FGD1P98174 961 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
PRPF8-208ENST00000573716 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 SECISBP2LQ93073 1101 aaKnown RBP13.67□□□□□ -0.22
PRPF8-208ENST00000573716 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 RIT2Q99578 217 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 MARCH5Q9NX47 278 aa13.67□□□□□ -0.22
PRPF8-208ENST00000573716 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
PRPF8-208ENST00000573716 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 TDRD15B5MCY1 1934 aaKnown RBP13.66□□□□□ -0.22
PRPF8-208ENST00000573716 ESYT2A0FGR8 921 aa13.66□□□□□ -0.22
PRPF8-208ENST00000573716 F8W810 466 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms