RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 IL23AQ9NPF7 189 aa17.08■□□□□ 0.32
CDH11-209ENST00000564317 PRMT7Q9NVM4 692 aaPredicted RBP17.08■□□□□ 0.32
CDH11-209ENST00000564317 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
CDH11-209ENST00000564317 KCNG1Q9UIX4 513 aa17.08■□□□□ 0.32
CDH11-209ENST00000564317 TBX20Q9UMR3 447 aa17.08■□□□□ 0.32
CDH11-209ENST00000564317 GDAQ9Y2T3 454 aa17.08■□□□□ 0.32
CDH11-209ENST00000564317 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 H0YCG3 227 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 H0YGN5 161 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 K7ERI5 159 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 BIN1O00499 593 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 GPR182O15218 404 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 MGEA5O60502 916 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 PRPF6O94906 941 aaKnown RBP17.07■□□□□ 0.32
CDH11-209ENST00000564317 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
CDH11-209ENST00000564317 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH11-209ENST00000564317 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 CAVIN1Q6NZI2 390 aaKnown RBP17.07■□□□□ 0.32
CDH11-209ENST00000564317 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
CDH11-209ENST00000564317 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 SEPT8Q92599 483 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
CDH11-209ENST00000564317 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
CDH11-209ENST00000564317 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 ACKR2O00590 384 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 ERLIN2O94905 339 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 BMP6P22004 513 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 HOXD13P35453 343 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 PSMD2Q13200 908 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 MORC3Q14149 939 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 DSC3Q14574 896 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 L1TD1Q5T7N2 865 aaKnown RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 SCFD1Q8WVM8 642 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 LBHD1Q9BQE6 289 aaPredicted RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 RMND1Q9NWS8 449 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
CDH11-209ENST00000564317 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
CDH11-209ENST00000564317 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDH11-209ENST00000564317 STRN3Q13033 797 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
CDH11-209ENST00000564317 ALCAMQ13740 583 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDH11-209ENST00000564317 BMT2Q1RMZ1 405 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 CNKSR3Q6P9H4 555 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
CDH11-209ENST00000564317 ZNF507Q8TCN5 953 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
CDH11-209ENST00000564317 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
CDH11-209ENST00000564317 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
CDH11-209ENST00000564317 UBE4BO95155 1302 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 TISP43B9A030 160 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 PIGRP01833 764 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 PFKMP08237 780 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 SCP2P22307 547 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 MLLT1Q03111 559 aaPredicted RBP17.04■□□□□ 0.32
CDH11-209ENST00000564317 UBXN11Q5T124 520 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 ZNF658Q5TYW1 1059 aaPredicted RBP17.04■□□□□ 0.32
CDH11-209ENST00000564317 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 RTN4RL1Q86UN2 441 aaPredicted RBP17.04■□□□□ 0.32
CDH11-209ENST00000564317 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
CDH11-209ENST00000564317 APBB2Q92870 758 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
CDH11-209ENST00000564317 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDH11-209ENST00000564317 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
CDH11-209ENST00000564317 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 ABLIM1O14639 778 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 AXLP30530 894 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
CDH11-209ENST00000564317 TMEM240Q5SV17 173 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 ZBTB45Q96K62 511 aaPredicted RBP17.03■□□□□ 0.32
CDH11-209ENST00000564317 ADAM2Q99965 735 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
CDH11-209ENST00000564317 A0A1B0GUA9 196 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 CD44P16070 742 aaKnown RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 PROZP22891 400 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 ABCD1P33897 745 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 PRCPP42785 496 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 NOTUMQ6P988 496 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 PSRC1Q6PGN9 363 aaPredicted RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms