RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 ACCSQ96QU6 501 aa16.21■□□□□ 0.19
CDH11-207ENST00000563255 CTAGE1Q96RT6 745 aa16.21■□□□□ 0.19
CDH11-207ENST00000563255 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
CDH11-207ENST00000563255 TMEM39AQ9NV64 488 aa16.21■□□□□ 0.19
CDH11-207ENST00000563255 TBX20Q9UMR3 447 aa16.21■□□□□ 0.19
CDH11-207ENST00000563255 MROH7Q68CQ1 1323 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 SMTNL1A8MU46 457 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 K7ERI5 159 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 PDXKO00764 312 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 IKBKBO14920 756 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 KIAA0355O15063 1070 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 GPR32O75388 356 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 VTNP04004 478 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 HOXD13P35453 343 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 PHKA2P46019 1235 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
CDH11-207ENST00000563255 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
CDH11-207ENST00000563255 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 IQCB1Q15051 598 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 KLHL10Q6JEL2 608 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 SRGAP1Q7Z6B7 1085 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 MAP4K3Q8IVH8 894 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
CDH11-207ENST00000563255 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 MED15Q96RN5 788 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 KIFC3Q9BVG8 833 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 FAM49AQ9H0Q0 323 aaPredicted RBP16.2■□□□□ 0.18
CDH11-207ENST00000563255 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 CBX8Q9HC52 389 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 CGNQ9P2M7 1197 aaKnown RBP16.2■□□□□ 0.18
CDH11-207ENST00000563255 EXOC7Q9UPT5 735 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 CTNND2Q9UQB3 1225 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 TRAF3IP3Q9Y228 551 aa16.2■□□□□ 0.18
CDH11-207ENST00000563255 TANC1Q9C0D5 1861 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 A0A087WZ62 844 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 DCDC2CA8MYV0 355 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 B4GALT4O60513 344 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 CAND2O75155 1236 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 EPHB4P54760 987 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 MYL5Q02045 173 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 KCNA1Q09470 495 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 ANKRD40Q6AI12 368 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 TAS1R3Q7RTX0 852 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 DHX40Q8IX18 779 aaKnown RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 MAFAQ8NHW3 353 aaPredicted RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 FDXACB1Q9BRP7 624 aaPredicted RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 INO80BQ9C086 356 aaPredicted RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 CCDC113Q9H0I3 377 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 FZD8Q9H461 694 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 TYW1Q9NV66 732 aaKnown RBP16.19■□□□□ 0.18
CDH11-207ENST00000563255 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
CDH11-207ENST00000563255 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 TGFB1I1O43294 461 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 CD4P01730 458 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 PIGRP01833 764 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 PMS1P54277 932 aaKnown RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 FPGSQ05932 587 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 STRN3Q13033 797 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 NCAPHQ15003 741 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 PCBP1Q15365 356 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDH11-207ENST00000563255 NFIL3Q16649 462 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 MAPK6Q16659 721 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 FAM187BQ17R55 369 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 ZCWPW2Q504Y3 356 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 TTI2Q6NXR4 508 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 NLRP7Q8WX94 980 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 TSG101Q99816 390 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 RBSNQ9H1K0 784 aa16.18■□□□□ 0.18
CDH11-207ENST00000563255 TTYH1Q9H313 450 aaPredicted RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
CDH11-207ENST00000563255 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 BECN2A8MW95 431 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 M0QZ92 97 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 TLR3O15455 904 aaKnown RBP16.17■□□□□ 0.18
CDH11-207ENST00000563255 STX17P56962 302 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 MRPS6P82932 125 aaKnown RBP16.17■□□□□ 0.18
CDH11-207ENST00000563255 MBTD1Q05BQ5 628 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 RBL2Q08999 1139 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 GSE1Q14687 1217 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 KIZQ2M2Z5 673 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 TRIM71Q2Q1W2 868 aaKnown RBP16.17■□□□□ 0.18
CDH11-207ENST00000563255 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 AOPEPQ8N6M6 819 aa16.17■□□□□ 0.18
CDH11-207ENST00000563255 WNT8BQ93098 351 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms