RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 KMT5AQ9NQR1 393 aa5.13□□□□□ -1.59
USP8-216ENST00000561206 SNTG2Q9NY99 539 aa5.13□□□□□ -1.59
USP8-216ENST00000561206 CGB1A6NKQ9 187 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 RNASET2O00584 256 aaKnown RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 KCNQ2O43526 872 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 C1QL1O75973 258 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 ESRRBO95718 433 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 PRLP01236 227 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 ZBTB48P10074 688 aaPredicted RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 KCNA6P17658 529 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 ABCG1P45844 678 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 FNTBP49356 437 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 RBM25P49756 843 aaKnown RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 CC2D1AQ6P1N0 951 aaPredicted RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 CRELD2Q6UXH1 353 aaPredicted RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 FGD2Q7Z6J4 655 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 CMTM4Q8IZR5 234 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 C2orf69Q8N8R5 385 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 IGSF22Q8N9C0 903 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 OR5AN1Q8NGI8 311 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 CAGE1Q8TC20 777 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 ERCC4Q92889 916 aaPredicted RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 ARL8AQ96BM9 186 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 MRPL4Q9BYD3 311 aaKnown RBP5.12□□□□□ -1.59
USP8-216ENST00000561206 TLK1Q9UKI8 766 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 CHST2Q9Y4C5 530 aa5.12□□□□□ -1.59
USP8-216ENST00000561206 MTSS1O43312 755 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 HK1P19367 917 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 ANTXR2P58335 489 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 ROM1Q03395 351 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 BEAN1Q3B7T3 259 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 ZNF425Q6IV72 752 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 JMYQ8N9B5 988 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 ZSWIM2Q8NEG5 633 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 OR52N2Q8NGI0 321 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 E2F7Q96AV8 911 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 HIRIP3Q9BW71 556 aaPredicted RBP5.11□□□□□ -1.59
USP8-216ENST00000561206 TRIM39Q9HCM9 518 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 AKIP1Q9NQ31 210 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 SEMA4GQ9NTN9 838 aa5.11□□□□□ -1.59
USP8-216ENST00000561206 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 STC2O76061 302 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 RGS3P49796 1198 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 MECP2P51608 486 aaKnown RBP5.1□□□□□ -1.59
USP8-216ENST00000561206 SLC6A3Q01959 620 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 ABHD17BQ5VST6 288 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 ARMC5Q96C12 935 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 DCLRE1CQ96SD1 692 aaKnown RBP5.1□□□□□ -1.59
USP8-216ENST00000561206 NDC1Q9BTX1 674 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 HAPLN2Q9GZV7 340 aa5.1□□□□□ -1.59
USP8-216ENST00000561206 ZNF70Q9UC06 446 aaPredicted RBP5.1□□□□□ -1.59
USP8-216ENST00000561206 EIF2B4Q9UI10 523 aaKnown RBP5.1□□□□□ -1.59
USP8-216ENST00000561206 MPLP40238 635 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 NPEPPSP55786 919 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 VPS72Q15906 364 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 DGKDQ16760 1214 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 ARHGAP44Q17R89 818 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 DNAJC7Q99615 494 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 ADGRE3Q9BY15 652 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 ENKD1Q9H0I2 346 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 NCOA5Q9HCD5 579 aaKnown RBP5.09□□□□□ -1.59
USP8-216ENST00000561206 KCMF1Q9P0J7 381 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 MAGEL2Q9UJ55 1249 aa5.09□□□□□ -1.59
USP8-216ENST00000561206 PROP1O75360 226 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 GTF2F1P35269 517 aaKnown RBP eCLIP5.08□□□□□ -1.6
USP8-216ENST00000561206 KRT40Q6A162 431 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 SLFN12LQ6IEE8 588 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 GDF7Q7Z4P5 450 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 SH2D3CQ8N5H7 860 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 MAML3Q96JK9 1138 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 DUSP26Q9BV47 211 aa5.08□□□□□ -1.6
USP8-216ENST00000561206 C14orf93Q9H972 538 aaKnown RBP5.08□□□□□ -1.6
USP8-216ENST00000561206 POLR3BQ9NW08 1133 aaPredicted RBP5.08□□□□□ -1.6
USP8-216ENST00000561206 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.08□□□□□ -1.6
USP8-216ENST00000561206 MAST3O60307 1309 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 UBA6A0AVT1 1052 aaPredicted RBP5.07□□□□□ -1.6
USP8-216ENST00000561206 M0R2C6 588 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 DVL2O14641 736 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 HOXA3O43365 443 aaPredicted RBP5.07□□□□□ -1.6
USP8-216ENST00000561206 KRT37O76014 449 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 NCR1O76036 304 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 EGR2P11161 476 aaPredicted RBP5.07□□□□□ -1.6
USP8-216ENST00000561206 KIR2DL3P43628 341 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 KIF11P52732 1056 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 RBL2Q08999 1139 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 C2orf27AQ580R0 203 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 GLB1L3Q8NCI6 653 aaPredicted RBP5.07□□□□□ -1.6
USP8-216ENST00000561206 WDR92Q96MX6 357 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 CPEB1Q9BZB8 566 aaKnown RBP5.07□□□□□ -1.6
USP8-216ENST00000561206 PTCH2Q9Y6C5 1203 aa5.07□□□□□ -1.6
USP8-216ENST00000561206 GLRX3O76003 335 aaKnown RBP5.06□□□□□ -1.6
USP8-216ENST00000561206 APOBEC3AP31941 199 aaPredicted RBP5.06□□□□□ -1.6
USP8-216ENST00000561206 PLA2G5P39877 138 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 GUCY1B3Q02153 619 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 MPP3Q13368 585 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 TTC38Q5R3I4 469 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 ZCCHC8Q6NZY4 707 aaKnown RBP5.06□□□□□ -1.6
USP8-216ENST00000561206 BMP8AQ7Z5Y6 402 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms