RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
HERC1-207ENST00000560316 PGBD4Q96DM1 585 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 FAM193BQ96PV7 902 aaPredicted RBP18.68■□□□□ 0.58
HERC1-207ENST00000560316 RPS6KC1Q96S38 1066 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 CEP89Q96ST8 783 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 FOXQ1Q9C009 403 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 ZMYND12Q9H0C1 365 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 UNC45AQ9H3U1 944 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 SUCLA2Q9P2R7 463 aaPredicted RBP18.68■□□□□ 0.58
HERC1-207ENST00000560316 STK39Q9UEW8 545 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 GPR179Q6PRD1 2367 aa18.68■□□□□ 0.58
HERC1-207ENST00000560316 IGKV6-21A0A0C4DH24 114 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 GAS7O60861 476 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 LRRN2O75325 713 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 GLUD1P00367 558 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 POMCP01189 267 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 SOD2P04179 222 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 URODP06132 367 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 ADH1AP07327 375 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 SPATA31D3P0C874 917 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 DNM2P50570 870 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 SPATA31D4Q6ZUB0 917 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 ZNF410Q86VK4 478 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 SUMF1Q8NBK3 374 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 NXPE3Q969Y0 559 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 ZNF707Q96C28 371 aaPredicted RBP18.67■□□□□ 0.58
HERC1-207ENST00000560316 NLRP4Q96MN2 994 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 TMEM175Q9BSA9 504 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 NIFKQ9BYG3 293 aaKnown RBP18.67■□□□□ 0.58
HERC1-207ENST00000560316 INO80BQ9C086 356 aaPredicted RBP18.67■□□□□ 0.58
HERC1-207ENST00000560316 RSAD1Q9HA92 442 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 C6orf50Q9HD87 102 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 PRG3Q9Y2Y8 225 aaPredicted RBP18.67■□□□□ 0.58
HERC1-207ENST00000560316 CACNA1IQ9P0X4 2223 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
HERC1-207ENST00000560316 TPRP12270 2363 aaKnown RBP18.67■□□□□ 0.58
HERC1-207ENST00000560316 FANCMQ8IYD8 2048 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 KLF18A0A0U1RQI7 1052 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 ESYT2A0FGR8 921 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 EDIL3O43854 480 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 STBD1O95210 358 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 SFNP31947 248 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 ADD1P35611 737 aaKnown RBP18.66■□□□□ 0.58
HERC1-207ENST00000560316 JAK3P52333 1124 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
HERC1-207ENST00000560316 DCLRE1AQ6PJP8 1040 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 GET4Q7L5D6 327 aaPredicted RBP18.66■□□□□ 0.58
HERC1-207ENST00000560316 MAML2Q8IZL2 1156 aaPredicted RBP18.66■□□□□ 0.58
HERC1-207ENST00000560316 HERC2P3Q9BVR0 1158 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 MARCH5Q9NX47 278 aa18.66■□□□□ 0.58
HERC1-207ENST00000560316 NAP1L2Q9ULW6 460 aaPredicted RBP18.66■□□□□ 0.58
HERC1-207ENST00000560316 LAMP2P13473 410 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 XKR3Q5GH77 459 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 LRCH2Q5VUJ6 765 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 MRPL10Q7Z7H8 261 aaKnown RBP18.65■□□□□ 0.58
HERC1-207ENST00000560316 PJA1Q8NG27 643 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 SLC5A5Q92911 643 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 RIT2Q99578 217 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 TEKT3Q9BXF9 490 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 RHOBTB2Q9BYZ6 727 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 PIDD1Q9HB75 910 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 ANO2Q9NQ90 1003 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 AGPAT5Q9NUQ2 364 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 NUMBLQ9Y6R0 609 aa18.65■□□□□ 0.58
HERC1-207ENST00000560316 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
HERC1-207ENST00000560316 GLUD2P49448 558 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 HTR4Q13639 388 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 KIAA0319Q5VV43 1072 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 ELMSAN1Q6PJG2 1045 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 MIER3Q7Z3K6 550 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 PALB2Q86YC2 1186 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 ESYT1Q9BSJ8 1104 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 NT5C3AQ9H0P0 336 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 IFT122Q9HBG6 1241 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 SLC2A4RGQ9NR83 387 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 DPP7Q9UHL4 492 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 SSX2IPQ9Y2D8 614 aa18.64■□□□□ 0.57
HERC1-207ENST00000560316 SPTBN2O15020 2390 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 ANHXE9PGG2 379 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 F8W810 466 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 MAFO75444 373 aaPredicted RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 GNA11P29992 359 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 OR1G1P47890 313 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 UBXN11Q5T124 520 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 DHX32Q7L7V1 743 aaKnown RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 COLGALT2Q8IYK4 626 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 RNF168Q8IYW5 571 aaPredicted RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 CCDC12Q8WUD4 166 aaPredicted RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 B3GALT6Q96L58 329 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 RPP25Q9BUL9 199 aaKnown RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 RXFP1Q9HBX9 757 aa18.63■□□□□ 0.57
HERC1-207ENST00000560316 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.63■□□□□ 0.57
HERC1-207ENST00000560316 KMT2BQ9UMN6 2715 aaPredicted RBP18.63■□□□□ 0.57
HERC1-207ENST00000560316 PSMD10O75832 226 aa18.62■□□□□ 0.57
HERC1-207ENST00000560316 STARD6P59095 220 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms