RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 STIM2Q9P246 746 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 BAIAP2L1Q9UHR4 511 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 CEP104O60308 925 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 PAK2Q13177 524 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 BTNL9Q6UXG8 535 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 VSIG10LQ86VR7 867 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 UBL4BQ8N7F7 174 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 ELF1P32519 619 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 THPOP40225 353 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 PPM1FP49593 454 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 HIRAP54198 1017 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 GRB10Q13322 594 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 Q4G0T1 1027 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 KCTD16Q68DU8 428 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 ACAP3Q96P50 834 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 KCND2Q9NZV8 630 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 FEZ2Q9UHY8 353 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 MEIS2O14770 477 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 CLGNO14967 610 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 AP5Z1O43299 807 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 BUB1BO60566 1050 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 TADA3O75528 432 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 VIMP08670 466 aaKnown RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 MYBP10242 640 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 AKR1A1P14550 325 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 PTGER2P43116 358 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 GPR142Q7Z601 462 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 MIS12Q9H081 205 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 HMX1Q9NP08 348 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
CARMIL3-202ENST00000559694 C17orf102A2RUQ5 167 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 PDXKO00764 312 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 BUB1O43683 1085 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 ADCY3O60266 1144 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 HUS1O60921 280 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 DPYDQ12882 1025 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 RPS6KA1Q15418 735 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 ACRBPQ8NEB7 543 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 LBHD1Q9BQE6 289 aaPredicted RBP11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 VTA1Q9NP79 307 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 RIPK3Q9Y572 518 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 MYPNQ86TC9 1320 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 GUCY2FP51841 1108 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 SARNPP82979 210 aaKnown RBP11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 DUOXA2Q1HG44 320 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 ZNF699Q32M78 642 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 DAAM2Q86T65 1068 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 XPNPEP3Q9NQH7 507 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 SETD4Q9NVD3 440 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 GLI3P10071 1580 aa11.46□□□□□ -0.58
CARMIL3-202ENST00000559694 RSPH10B2B2RC85 870 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 RSPH10BP0C881 870 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 CCDC6Q16204 474 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 LBX2Q6XYB7 198 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 SRLQ86TD4 932 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 KLHL7Q8IXQ5 586 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 URGCPQ8TCY9 931 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 LRRC45Q96CN5 670 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 FAM81BQ96LP2 452 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 RASAL2Q9UJF2 1139 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 RNF8O76064 485 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 TOMM70O94826 608 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 INSRRP14616 1297 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 ZBED6P86452 979 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 RUFY4Q6ZNE9 571 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 TOGARAM2Q6ZUX3 1019 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 TADA2BQ86TJ2 420 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 TLK2Q86UE8 772 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 FBF1Q8TES7 1133 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 PAIP2Q9BPZ3 127 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 COPS5Q92905 334 aa11.45□□□□□ -0.58
CARMIL3-202ENST00000559694 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 MYO1FO00160 1098 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 ZBTB48P10074 688 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 FLT3LGP49771 235 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms