RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 IKBKEQ14164 716 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 AMHR2Q16671 573 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 FAM187BQ17R55 369 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 PSRC1Q6PGN9 363 aaPredicted RBP23.39■■□□□ 1.33
CASC4-204ENST00000557945 PPP4R3CPQ6ZMV5 832 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 OTOP2Q7RTS6 562 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 PRIMPOLQ96LW4 560 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 FGFBP2Q9BYJ0 223 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 TMX1Q9H3N1 280 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 SLC39A2Q9NP94 309 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 AGPAT5Q9NUQ2 364 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 TBX20Q9UMR3 447 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 USP20Q9Y2K6 914 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 ACKR2O00590 384 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 ZSCAN20P17040 1043 aaPredicted RBP23.38■■□□□ 1.33
CASC4-204ENST00000557945 ABCD1P33897 745 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 CASP5P51878 434 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 TMEM240Q5SV17 173 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 STXBP4Q6ZWJ1 553 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 TAS1R3Q7RTX0 852 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 CPB2Q96IY4 423 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.38■■□□□ 1.336e-12■□□□□ 8.7
CASC4-204ENST00000557945 FTHL17Q9BXU8 183 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 UBE2OQ9C0C9 1292 aaKnown RBP23.38■■□□□ 1.33
CASC4-204ENST00000557945 ST6GALNAC4Q9H4F1 302 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 RMND1Q9NWS8 449 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 PCDHB13Q9Y5F0 798 aa23.38■■□□□ 1.33
CASC4-204ENST00000557945 RHOBTB3O94955 611 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 GTF2BQ00403 316 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 PSMD2Q13200 908 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 KCNB1Q14721 858 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 GLIS3Q8NEA6 775 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 BICD1Q96G01 975 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 GSDMAQ96QA5 445 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 ADAM2Q99965 735 aa23.37■■□□□ 1.33
CASC4-204ENST00000557945 MRPL4Q9BYD3 311 aaKnown RBP23.37■■□□□ 1.33
CASC4-204ENST00000557945 CNTNAP2Q9UHC6 1331 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 TTLL13PA6NNM8 815 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 ZBBXA8MT70 800 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 MGEA5O60502 916 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 PRPF6O94906 941 aaKnown RBP23.36■■□□□ 1.33
CASC4-204ENST00000557945 EDN1P05305 212 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 ARF4P18085 180 aaPredicted RBP23.36■■□□□ 1.33
CASC4-204ENST00000557945 IBSPP21815 317 aaPredicted RBP23.36■■□□□ 1.33
CASC4-204ENST00000557945 AXLP30530 894 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 STK4Q13043 487 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 ALCAMQ13740 583 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 TWF2Q6IBS0 349 aaKnown RBP23.36■■□□□ 1.33
CASC4-204ENST00000557945 HVCN1Q96D96 273 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 ACCSQ96QU6 501 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 GDF15Q99988 308 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 CHST12Q9NRB3 414 aa23.36■■□□□ 1.33
CASC4-204ENST00000557945 ABHD14A-ACY1A0A1B0GW23 586 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 HOXA11P31270 313 aaPredicted RBP23.35■■□□□ 1.33
CASC4-204ENST00000557945 L1TD1Q5T7N2 865 aaKnown RBP23.35■■□□□ 1.33
CASC4-204ENST00000557945 NT5DC1Q5TFE4 455 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 ISM2Q6H9L7 571 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 NOTUMQ6P988 496 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 SPATA20Q8TB22 786 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 KCNN1Q92952 543 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 TARS2Q9BW92 718 aaKnown RBP23.35■■□□□ 1.33
CASC4-204ENST00000557945 KIAA1468Q9P260 1216 aa23.35■■□□□ 1.33
CASC4-204ENST00000557945 BIN1O00499 593 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 PPP1R37O75864 691 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 BAIAP3O94812 1187 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 SARSP49591 514 aaKnown RBP23.34■■□□□ 1.33
CASC4-204ENST00000557945 DSC3Q14574 896 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 NFKBIBQ15653 356 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 ATF7IP2Q5U623 682 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 RTN4RL1Q86UN2 441 aaPredicted RBP23.34■■□□□ 1.33
CASC4-204ENST00000557945 CDR2LQ86X02 465 aaPredicted RBP23.34■■□□□ 1.33
CASC4-204ENST00000557945 SYCP3Q8IZU3 236 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 STRA6Q9BX79 667 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 MAN1B1Q9UKM7 699 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 EXOC7Q9UPT5 735 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 GDAQ9Y2T3 454 aa23.34■■□□□ 1.33
CASC4-204ENST00000557945 ENPP3O14638 875 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 EIF3DO15371 548 aaKnown RBP eCLIP23.33■■□□□ 1.33
CASC4-204ENST00000557945 EFCAB14O75071 495 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 LIG4P49917 911 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 KCNA1Q09470 495 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 CCDC183Q5T5S1 534 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 FAM43BQ6ZT52 329 aaPredicted RBP23.33■■□□□ 1.33
CASC4-204ENST00000557945 EPM2AIP1Q7L775 607 aaPredicted RBP23.33■■□□□ 1.33
CASC4-204ENST00000557945 MAP4K3Q8IVH8 894 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 KIAA0895Q8NCT3 520 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 LINC01599Q8WXQ3 324 aa23.33■■□□□ 1.33
CASC4-204ENST00000557945 ACO2Q99798 780 aaKnown RBP23.33■■□□□ 1.33
CASC4-204ENST00000557945 TSPYL2Q9H2G4 693 aaPredicted RBP23.33■■□□□ 1.33
CASC4-204ENST00000557945 MTIF3Q9H2K0 278 aaKnown RBP23.33■■□□□ 1.33
CASC4-204ENST00000557945 A0A1B0GUA9 196 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 HNRNPDLO14979 420 aaKnown RBP23.32■■□□□ 1.32
CASC4-204ENST00000557945 N4BP3O15049 544 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 KCNJ6P48051 423 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 C9orf50Q5SZB4 431 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 CAVIN1Q6NZI2 390 aaKnown RBP23.32■■□□□ 1.32
CASC4-204ENST00000557945 ZPBP2Q6X784 338 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.32■■□□□ 1.32
CASC4-204ENST00000557945 NELFCDQ8IXH7 590 aa23.32■■□□□ 1.32
CASC4-204ENST00000557945 ZNF507Q8TCN5 953 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms