RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 RDH13Q8NBN7 331 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 GANQ9H2C0 597 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 RNPEPQ9H4A4 650 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 FLRT1Q9NZU1 646 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 SUCLA2Q9P2R7 463 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-233ENST00000557529 MYO6Q9UM54 1294 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 Q9Y3F1 56 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
SHMT2-233ENST00000557529 LRRC53A6NM62 1247 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 PMM2O15305 246 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 C22orf31O95567 290 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 TNNT1P13805 278 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 PON1P27169 355 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
SHMT2-233ENST00000557529 MYL7Q01449 175 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 GRM1Q13255 1194 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-233ENST00000557529 MTF1Q14872 753 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 EFCAB12Q6NXP0 572 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
SHMT2-233ENST00000557529 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
SHMT2-233ENST00000557529 EPN1Q9Y6I3 576 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-233ENST00000557529 A6NJR5 290 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 DYNC1LI2O43237 492 aaPredicted RBP13.58□□□□□ -0.23
SHMT2-233ENST00000557529 EXTL3O43909 919 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.23
SHMT2-233ENST00000557529 NDUFA10O95299 355 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.23
SHMT2-233ENST00000557529 IGHA2P01877 340 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 ZNF286BP0CG31 522 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 TRIM49P0CI25 452 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 TRIM49CP0CI26 452 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 SLC9A1P19634 815 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 TMOD1P28289 359 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 CYP2C19P33261 490 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 POU5F1BQ06416 359 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 DRP2Q13474 957 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 PRAMEF19Q5SWL8 479 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 ZPBP2Q6X784 338 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 CBWD2Q8IUF1 395 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 LRRC71Q8N4P6 559 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 METTL13Q8N6R0 699 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 RNF149Q8NC42 400 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 SAAL1Q96ER3 474 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 CHP1Q99653 195 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 DESI2Q9BSY9 194 aa13.58□□□□□ -0.23
SHMT2-233ENST00000557529 MRPL4Q9BYD3 311 aaKnown RBP13.58□□□□□ -0.23
SHMT2-233ENST00000557529 GOLGA8IPA6NC78 632 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 ZNF233A6NK53 670 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 GOLGA8JA6NMD2 632 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
SHMT2-233ENST00000557529 ADRB2P07550 413 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 SRGAP2CP0DJJ0 459 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 UCHL3P15374 230 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 RFX1P22670 979 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 KLRC1P26715 233 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 GTF2H1P32780 548 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 PSMC4P43686 418 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CPT1AP50416 773 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 IGBP1P78318 339 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 KRT83P78385 493 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CCL14Q16627 93 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 MAPK6Q16659 721 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 DPY19L2P1Q6NXN4 242 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 RHPN2Q8IUC4 686 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CAPNS2Q96L46 248 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CCDC42Q96M95 316 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 SPAG5Q96R06 1193 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CCDC113Q9H0I3 377 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 AP5M1Q9H0R1 490 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 NHEJ1Q9H9Q4 299 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-233ENST00000557529 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
SHMT2-233ENST00000557529 A0A0B4J269 797 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 SSU72P8A0A1W2PR75 194 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 ADCY6O43306 1168 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms