RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 KIF22Q14807 665 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 FBXW10Q5XX13 1052 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 MYCBPAPQ8TBZ2 947 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 FAM151AQ8WW52 585 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 PPM1EQ8WY54 764 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 CCDC127Q96BQ5 260 aa19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
XRCC3-218ENST00000557439 ALAS1P13196 640 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 CAP2P40123 477 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 RARRES1P49788 294 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 PEX3P56589 373 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 KRT71Q3SY84 523 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 NLRP14Q86W24 1093 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 TOPORSQ9NS56 1045 aaPredicted RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 HSPBP1Q9NZL4 362 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 SMIM23A6NLE4 172 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 CYP26A1O43174 497 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 PLTPP55058 493 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 MAGOHP61326 146 aaKnown RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 MRPS9P82933 396 aaKnown RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 NSMFQ6X4W1 530 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 NOP9Q86U38 636 aaKnown RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 SLC47A2Q86VL8 602 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 CBWD2Q8IUF1 395 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 MDM1Q8TC05 714 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 MAGOHBQ96A72 148 aaKnown RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.65
XRCC3-218ENST00000557439 RAVER2Q9HCJ3 691 aaKnown RBP19.14■□□□□ 0.65
XRCC3-218ENST00000557439 PTENP60484 403 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 PPM1KQ8N3J5 372 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 SEMA4DQ92854 862 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 LARSQ9P2J5 1176 aaKnown RBP19.13■□□□□ 0.65
XRCC3-218ENST00000557439 ATP9AO75110 1047 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 MYCLP12524 364 aaPredicted RBP19.13■□□□□ 0.65
XRCC3-218ENST00000557439 VCAM1P19320 739 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 SETQ01105 290 aaPredicted RBP19.13■□□□□ 0.65
XRCC3-218ENST00000557439 RSBN1LQ6PCB5 846 aaPredicted RBP19.13■□□□□ 0.65
XRCC3-218ENST00000557439 LRIG3Q6UXM1 1119 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 HAUS6Q7Z4H7 955 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 FMO2Q99518 471 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 TMEM117Q9H0C3 514 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 UBE4BO95155 1302 aa19.13■□□□□ 0.65
XRCC3-218ENST00000557439 ERLIN2O94905 339 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 CHRNB2P17787 502 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 COMTP21964 271 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 QPCTQ16769 361 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 EPC2Q52LR7 807 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 TTC27Q6P3X3 843 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 PHLDB2Q86SQ0 1253 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 FBXO25Q8TCJ0 367 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 CNKSR1Q969H4 720 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 KREMEN1Q96MU8 473 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 PDGFDQ9GZP0 370 aaPredicted RBP19.12■□□□□ 0.65
XRCC3-218ENST00000557439 EHMT1Q9H9B1 1298 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 SLC12A6Q9UHW9 1150 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 ANKRD63C9JTQ0 380 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 SORBS3O60504 671 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 MMEP08473 750 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 BCRP11274 1271 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 JAMLQ86YT9 394 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 CLEC4DQ8WXI8 215 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 SEC14L1Q92503 715 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 DHX38Q92620 1227 aaKnown RBP19.12■□□□□ 0.65
XRCC3-218ENST00000557439 TAAR1Q96RJ0 339 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 CARD9Q9H257 536 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 DAAM1Q9Y4D1 1078 aa19.12■□□□□ 0.65
XRCC3-218ENST00000557439 COL4A5P29400 1685 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 P4HBP07237 508 aaKnown RBP19.11■□□□□ 0.65
XRCC3-218ENST00000557439 KCNJ1P48048 391 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 SLC9A9Q8IVB4 645 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 RIT2Q99578 217 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 EPB41L4BQ9H329 900 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 PTPN22Q9Y2R2 807 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 TELO2Q9Y4R8 837 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 CAND2O75155 1236 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 YWHABP31946 246 aaKnown RBP19.11■□□□□ 0.65
XRCC3-218ENST00000557439 IFFO1Q0D2I5 559 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 FAM102BQ5T8I3 360 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 DUPD1Q68J44 220 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 INTS8Q75QN2 995 aaKnown RBP19.11■□□□□ 0.65
XRCC3-218ENST00000557439 PRELID2Q8N945 189 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 XXYLT1Q8NBI6 393 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 EPS8L1Q8TE68 723 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 ACCSQ96QU6 501 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 ERP44Q9BS26 406 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 AGO4Q9HCK5 861 aaKnown RBP19.11■□□□□ 0.65
XRCC3-218ENST00000557439 FAM114A2Q9NRY5 505 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 ZDHHC18Q9NUE0 388 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 USP20Q9Y2K6 914 aa19.11■□□□□ 0.65
XRCC3-218ENST00000557439 TLDC2A0PJX2 215 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 PYGMP11217 842 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 PLS3P13797 630 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 MXI1P50539 228 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 HSD17B4P51659 736 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 IFT88Q13099 833 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 RNF187Q5TA31 235 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms