RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 CMASQ8NFW8 434 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-224ENST00000557024 PJA1Q8NG27 643 aa10.52□□□□□ -0.73
SYNE2-224ENST00000557024 STAMQ92783 540 aa10.52□□□□□ -0.73
SYNE2-224ENST00000557024 ANO3Q9BYT9 981 aa10.52□□□□□ -0.73
SYNE2-224ENST00000557024 WDR6Q9NNW5 1121 aaKnown RBP10.52□□□□□ -0.73
SYNE2-224ENST00000557024 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
SYNE2-224ENST00000557024 EPS15L1Q9UBC2 864 aa10.52□□□□□ -0.73
SYNE2-224ENST00000557024 MAFBQ9Y5Q3 323 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-224ENST00000557024 DENND4AQ7Z401 1863 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 MEIS3P2A8K0S8 358 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
SYNE2-224ENST00000557024 MAGEB2O15479 319 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 DHX15O43143 795 aaKnown RBP10.51□□□□□ -0.73
SYNE2-224ENST00000557024 RFPL2O75678 378 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 TMOD1P28289 359 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 PHKA2P46019 1235 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 GPC3P51654 580 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 PLA2G4DQ86XP0 818 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 MRPL17Q9NRX2 175 aaKnown RBP10.51□□□□□ -0.73
SYNE2-224ENST00000557024 SPATA6Q9NWH7 488 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-224ENST00000557024 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
SYNE2-224ENST00000557024 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 FAM86B1E9PN63 330 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 SPTLC1O15269 473 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 INPPL1O15357 1258 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 LILRB3O75022 631 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 FOSP01100 380 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 FAM86B2P0C5J1 330 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 SREBF1P36956 1147 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 AK2P54819 239 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 NAPAP54920 295 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 LMNB2Q03252 620 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 HTR4Q13639 388 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 TWF2Q6IBS0 349 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 ZNF280BQ86YH2 543 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 GPR161Q8N6U8 529 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 ATRIPQ8WXE1 791 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 SMG7Q92540 1137 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 NXPE3Q969Y0 559 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 HS3ST6Q96QI5 342 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 REPIN1Q9BWE0 567 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 RIC8AQ9NPQ8 531 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 GABBR1Q9UBS5 961 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 TCEAL9Q9UHQ7 104 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 RALYQ9UKM9 306 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 USP18Q9UMW8 372 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 SMG5Q9UPR3 1016 aaKnown RBP10.5□□□□□ -0.73
SYNE2-224ENST00000557024 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
SYNE2-224ENST00000557024 USP24Q9UPU5 2620 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 IGLV3-22A0A075B6J6 115 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 PRR5-ARHGAP8B1AHC4 643 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 TEX28O15482 410 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 PRC1O43663 620 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 OFD1O75665 1012 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 REC8O95072 547 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 GLUD1P00367 558 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 URODP06132 367 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 PSAPP07602 524 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 SPATA31D3P0C874 917 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 LAMP2P13473 410 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ADCY7P51828 1080 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ARHGAP8P85298 464 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 CSTF1Q05048 431 aaKnown RBP10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ZNF528Q3MIS6 628 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 PADI6Q6TGC4 694 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 SPATA31D4Q6ZUB0 917 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 SECISBP2LQ93073 1101 aaKnown RBP10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ZNF707Q96C28 371 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-224ENST00000557024 CHAMP1Q96JM3 812 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 ZNF577Q9BSK1 485 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 RTKNQ9BST9 563 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
SYNE2-224ENST00000557024 SLC2A4RGQ9NR83 387 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 CHST12Q9NRB3 414 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 PIN4Q9Y237 131 aaKnown RBP10.49□□□□□ -0.73
SYNE2-224ENST00000557024 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
SYNE2-224ENST00000557024 MAP1BP46821 2468 aaKnown RBP10.48□□□□□ -0.73
SYNE2-224ENST00000557024 ANHXE9PGG2 379 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 SH2B2O14492 632 aaPredicted RBP10.48□□□□□ -0.73
SYNE2-224ENST00000557024 ZNF862O60290 1169 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 DDHD2O94830 711 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 OATP04181 439 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 ADH1AP07327 375 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 ADRB1P08588 477 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 STARD6P59095 220 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 GPC5P78333 572 aa10.48□□□□□ -0.73
SYNE2-224ENST00000557024 DRP2Q13474 957 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms