RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MRPS27Q92552 414 aaKnown RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 CCDC51Q96ER9 411 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 CPB2Q96IY4 423 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 EIF2AQ9BY44 585 aaKnown RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 TLR9Q9NR96 1032 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 TBC1D13Q9NVG8 400 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 CLDND1Q9NY35 253 aa11.46□□□□□ -0.57
SHMT2-224ENST00000556737 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-224ENST00000556737 CNTNAP2Q9UHC6 1331 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 H3BQV1 296 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 INO80B-WBP1J3KQ70 363 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 INPPL1O15357 1258 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 EDN1P05305 212 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 IL9P15248 144 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 CYP11B2P19099 503 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 CDC25AP30304 524 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 AXLP30530 894 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 PPM1AP35813 382 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 BCAR1P56945 870 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 NOMO2Q5JPE7 1267 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 GLB1LQ6UWU2 654 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 KCNK18Q7Z418 384 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 VN1R2Q8NFZ6 395 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 SNX21Q969T3 373 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 BHMT2Q9H2M3 363 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 DDX19AQ9NUU7 478 aaKnown RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 INPP5FQ9Y2H2 1132 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 IPPQ9Y573 584 aa11.45□□□□□ -0.58
SHMT2-224ENST00000556737 TDRD15B5MCY1 1934 aaKnown RBP11.45□□□□□ -0.58
SHMT2-224ENST00000556737 C5orf42Q9H799 3197 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NCOR1O75376 2440 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 LRRIQ4A6NIV6 560 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 E9PMD0 336 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NCK2O43639 380 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NAMPTP43490 491 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NRIP1P48552 1158 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 ADAM15Q13444 863 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 HYIQ5T013 277 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 PLPP4Q5VZY2 271 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NOTUMQ6P988 496 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 ZNF280BQ86YH2 543 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 DAW1Q8N136 415 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 TCF25Q9BQ70 676 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 VN1R3Q9BXE9 311 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 NXF3Q9H4D5 531 aaKnown RBP11.44□□□□□ -0.58
SHMT2-224ENST00000556737 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 RSAD1Q9HA92 442 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 CD320Q9NPF0 282 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 DNAJB4Q9UDY4 337 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 HES2Q9Y543 173 aa11.44□□□□□ -0.58
SHMT2-224ENST00000556737 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 DDHD2O94830 711 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 EYA4O95677 639 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 SLC11A1P49279 550 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 RBM10P98175 930 aaKnown RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 MAPK7Q13164 816 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 KCNC3Q14003 757 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 CLUL1Q15846 466 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 DUSP6Q16828 381 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 FAM187BQ17R55 369 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 LARP1BQ659C4 914 aaKnown RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 PDE12Q6L8Q7 609 aaKnown RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 DTHD1Q6ZMT9 781 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 PNMA5Q96PV4 448 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 FZD8Q9H461 694 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 PRMT7Q9NVM4 692 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-224ENST00000556737 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
SHMT2-224ENST00000556737 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 A0A1B0GUA9 196 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 VWA3AA6NCI4 1184 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 PER2O15055 1255 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 MBTPS2O43462 519 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms