RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CYP26C1Q6V0L0 522 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 ZNF410Q86VK4 478 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 PJA1Q8NG27 643 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 CRYGNQ8WXF5 182 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 SHDQ96IW2 340 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 RPS6KC1Q96S38 1066 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 SH2D3AQ9BRG2 576 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 TMEM175Q9BSA9 504 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 RSAD1Q9HA92 442 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 C6orf50Q9HD87 102 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 SPATA6Q9NWH7 488 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-219ENST00000556432 DLGAP2Q9P1A6 1054 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 KANSL3Q9P2N6 904 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-219ENST00000556432 TMEM150BA6NC51 233 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 POTEMA6NI47 508 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 NRP1O14786 923 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 ZNF623O75123 536 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 SOD2P04179 222 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 SFNP31947 248 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 GLUD2P49448 558 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 SUMF1Q8NBK3 374 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 CCDC12Q8WUD4 166 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-219ENST00000556432 SECISBP2LQ93073 1101 aaKnown RBP15.65■□□□□ 0.1
ACTN1-219ENST00000556432 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 HERC2P3Q9BVR0 1158 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.65■□□□□ 0.1
ACTN1-219ENST00000556432 CDV3Q9UKY7 258 aaKnown RBP15.65■□□□□ 0.1
ACTN1-219ENST00000556432 NUMBLQ9Y6R0 609 aa15.65■□□□□ 0.1
ACTN1-219ENST00000556432 CACNA1IQ9P0X4 2223 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 ADAMTS3O15072 1205 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 LAMTOR5O43504 91 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 LRRN2O75325 713 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 LAMP2P13473 410 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 SDHBP21912 280 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 OR1G1P47890 313 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 AFF1P51825 1210 aaKnown RBP15.64■□□□□ 0.09
ACTN1-219ENST00000556432 HTR4Q13639 388 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
ACTN1-219ENST00000556432 PFKFB3Q16875 520 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-219ENST00000556432 VARS2Q5ST30 1063 aaKnown RBP15.64■□□□□ 0.09
ACTN1-219ENST00000556432 TAS1R1Q7RTX1 841 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 MIER3Q7Z3K6 550 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 GLYCTKQ8IVS8 523 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 KSR1Q8IVT5 923 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 ATRIPQ8WXE1 791 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 TEKT3Q9BXF9 490 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 BCO2Q9BYV7 579 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 LSG1Q9H089 658 aaKnown RBP15.64■□□□□ 0.09
ACTN1-219ENST00000556432 UNC45AQ9H3U1 944 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 CACNA1GO43497 2377 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 CNTNAP2Q9UHC6 1331 aa15.64■□□□□ 0.09
ACTN1-219ENST00000556432 KMT2BQ9UMN6 2715 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-219ENST00000556432 KLF18A0A0U1RQI7 1052 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 SPTLC1O15269 473 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 MSH4O15457 936 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 GLULP15104 373 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 GNA11P29992 359 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 CSTF1Q05048 431 aaKnown RBP15.63■□□□□ 0.09
ACTN1-219ENST00000556432 UBXN2BQ14CS0 331 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 XKR3Q5GH77 459 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 LENG9Q96B70 501 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 ZNF707Q96C28 371 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-219ENST00000556432 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 RIT2Q99578 217 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 RHOBTB2Q9BYZ6 727 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 PLEKHA4Q9H4M7 779 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 ANO2Q9NQ90 1003 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 SLC2A4RGQ9NR83 387 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 AGPAT5Q9NUQ2 364 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 DOCK8Q8NF50 2099 aa15.63■□□□□ 0.09
ACTN1-219ENST00000556432 FANCMQ8IYD8 2048 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 ESYT2A0FGR8 921 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 GAS2O43903 313 aaKnown RBP15.62■□□□□ 0.09
ACTN1-219ENST00000556432 CDC27P30260 824 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 CIITAP33076 1130 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 FGD1P98174 961 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 SNW1Q13573 536 aaKnown RBP15.62■□□□□ 0.09
ACTN1-219ENST00000556432 KIAA0319Q5VV43 1072 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 GPR161Q8N6U8 529 aaKnown RBP15.62■□□□□ 0.09
ACTN1-219ENST00000556432 GJA10Q969M2 543 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 NIFKQ9BYG3 293 aaKnown RBP15.62■□□□□ 0.09
ACTN1-219ENST00000556432 ZMYND12Q9H0C1 365 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 MARCH5Q9NX47 278 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 ZDHHC7Q9NXF8 308 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 USP18Q9UMW8 372 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 WDR81Q562E7 1941 aa15.62■□□□□ 0.09
ACTN1-219ENST00000556432 ANHXE9PGG2 379 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 NR1I2O75469 434 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 FSHRP23945 695 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 ATXN1P54253 815 aaKnown RBP15.61■□□□□ 0.09
ACTN1-219ENST00000556432 STARD6P59095 220 aa15.61■□□□□ 0.09
ACTN1-219ENST00000556432 GPC5P78333 572 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms