RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 CATSPER4Q7RTX7 472 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
GABRB3-210ENST00000556166 SCFD1Q8WVM8 642 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
GABRB3-210ENST00000556166 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 KCNG1Q9UIX4 513 aa12.62□□□□□ -0.39
GABRB3-210ENST00000556166 GPR182O15218 404 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 GCNT3O95395 438 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 PAK2Q13177 524 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 PSMD2Q13200 908 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 MORC3Q14149 939 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 MAPK6Q16659 721 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 UBXN11Q5T124 520 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 SLC39A4Q6P5W5 647 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 CDR2LQ86X02 465 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 ZNF507Q8TCN5 953 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 SEPT8Q92599 483 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 TARS2Q9BW92 718 aaKnown RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 PRMT7Q9NVM4 692 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-210ENST00000556166 MAPK8IP1Q9UQF2 711 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
GABRB3-210ENST00000556166 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 TISP43B9A030 160 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ANKRD63C9JTQ0 380 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ENPP3O14638 875 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ABLIM1O14639 778 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PRPF4BQ13523 1007 aaKnown RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 L1TD1Q5T7N2 865 aaKnown RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 EEF1DP3Q658K8 133 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 TET1Q8NFU7 2136 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ZBTB45Q96K62 511 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 HAPLN2Q9GZV7 340 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PTPRHQ9HD43 1115 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 CEP290O15078 2479 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 H0YCG3 227 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PTMSP20962 102 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PRCPP42785 496 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 MLLT1Q03111 559 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 BMT2Q1RMZ1 405 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ZNF658Q5TYW1 1059 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 RPUSD2Q8IZ73 545 aaKnown RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PRIMPOLQ96LW4 560 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ACCSQ96QU6 501 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 ADAM2Q99965 735 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.39
GABRB3-210ENST00000556166 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 CNTNAP2Q9UHC6 1331 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 SIP14410 1827 aa12.6□□□□□ -0.39
GABRB3-210ENST00000556166 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 EIF3DO15371 548 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 ERLIN2O94905 339 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 PIGRP01833 764 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 FGBP02675 491 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 PROZP22891 400 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 ADSSP30520 456 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 FAM189BP81408 668 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 STRN3Q13033 797 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 GDF15Q99988 308 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 CXXC1Q9P0U4 656 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 PIN4Q9Y237 131 aaKnown RBP12.59□□□□□ -0.39
GABRB3-210ENST00000556166 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
GABRB3-210ENST00000556166 C9IYK1 514 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 PFKMP08237 780 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 SCP2P22307 547 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms