RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SPATA33Q96N06 139 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 WDR24Q96S15 920 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 FANCGO15287 622 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 PMM2O15305 246 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
VPS33B-205ENST00000556096 GAS2O43903 313 aaKnown RBP16.03■□□□□ 0.16
VPS33B-205ENST00000556096 FKTNO75072 461 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 N4BP1O75113 896 aaKnown RBP16.03■□□□□ 0.16
VPS33B-205ENST00000556096 PLEKP08567 350 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-205ENST00000556096 GARTP22102 1010 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 ADSSP30520 456 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 VAMP7P51809 220 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-205ENST00000556096 APBA1Q02410 837 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 ENPEPQ07075 957 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 GRB14Q14449 540 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 SPA17Q15506 151 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 GLG1Q92896 1179 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
VPS33B-205ENST00000556096 GLRA2P23416 452 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
VPS33B-205ENST00000556096 KIF11P52732 1056 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 LAMC2Q13753 1193 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 TAS1R3Q7RTX0 852 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 ASAP3Q8TDY4 903 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 ATP8B4Q8TF62 1192 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
VPS33B-205ENST00000556096 AKR1B10O60218 316 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 TRIM49P0CI25 452 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 TRIM49CP0CI26 452 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 PSMC4P43686 418 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 VAV2P52735 878 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 MYL7Q01449 175 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 ASIC2Q16515 512 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 CBWD6Q4V339 395 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 CBWD3Q5JTY5 395 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 CBWD5Q5RIA9 395 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 SLC39A4Q6P5W5 647 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 KIAA1328Q86T90 577 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 COPS5Q92905 334 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 SPAG5Q96R06 1193 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-205ENST00000556096 TMEM134Q9H6X4 195 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-205ENST00000556096 FHOD1Q9Y613 1164 aa16.02■□□□□ 0.15
VPS33B-205ENST00000556096 BZW2Q9Y6E2 419 aaKnown RBP16.02■□□□□ 0.15
VPS33B-205ENST00000556096 IGKV6-21A0A0C4DH24 114 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 RBAK-RBAKDNI3L0D1 243 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 ZNF263O14978 683 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 KIAA0391O15091 583 aaKnown RBP16.01■□□□□ 0.15
VPS33B-205ENST00000556096 KRT86O43790 486 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 ABL1P00519 1130 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 PIGRP01833 764 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 JAM2P57087 298 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 ARHGAP1Q07960 439 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 CETN1Q12798 172 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 STRN3Q13033 797 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 RAPGEF1Q13905 1077 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 IER5Q5VY09 327 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 DPP9Q86TI2 863 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 TMC2Q8TDI7 906 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 EMID1Q96A84 441 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-205ENST00000556096 JAKMIP2Q96AA8 810 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-205ENST00000556096 TSGA10Q9BZW7 698 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 STYXL1Q9Y6J8 313 aa16.01■□□□□ 0.15
VPS33B-205ENST00000556096 HBP1O60381 514 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 GH1P01241 217 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 PRKCIP41743 596 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
VPS33B-205ENST00000556096 SNRNP35Q16560 246 aaKnown RBP16■□□□□ 0.15
VPS33B-205ENST00000556096 TDRD12Q587J7 1177 aaKnown RBP16■□□□□ 0.15
VPS33B-205ENST00000556096 C1orf220Q5T0J3 134 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 IRF2BP2Q7Z5L9 587 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 TXLNBQ8N3L3 684 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 ZSWIM2Q8NEG5 633 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 LMO3Q8TAP4 145 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 POMGNT1Q8WZA1 660 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 INTS2Q9H0H0 1204 aaKnown RBP16■□□□□ 0.15
VPS33B-205ENST00000556096 KIAA1586Q9HCI6 787 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 USP20Q9Y2K6 914 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 PCDHA13Q9Y5I0 950 aa16■□□□□ 0.15
VPS33B-205ENST00000556096 ZBTB42B2RXF5 422 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 K7ERI5 159 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms