RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 TAS1R3Q7RTX0 852 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 CATSPER4Q7RTX7 472 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 TMEM40Q8WWA1 233 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
SHMT2-221ENST00000555773 FGFBP2Q9BYJ0 223 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 CHST12Q9NRB3 414 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 CGNQ9P2M7 1197 aaKnown RBP13.69□□□□□ -0.22
SHMT2-221ENST00000555773 ST3GAL5Q9UNP4 418 aa13.69□□□□□ -0.22
SHMT2-221ENST00000555773 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
SHMT2-221ENST00000555773 SYCE3A1L190 88 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 PDXKO00764 312 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
SHMT2-221ENST00000555773 CYP2C18P33260 490 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 TYRO3Q06418 890 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 AMHR2Q16671 573 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 TMEM199Q8N511 208 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 GOLGA5Q8TBA6 731 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 DPF3Q92784 378 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 GBP3Q9H0R5 595 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-221ENST00000555773 PADI3Q9ULW8 664 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 MAPK8IP1Q9UQF2 711 aa13.68□□□□□ -0.22
SHMT2-221ENST00000555773 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 TSPAN1O60635 241 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 CAVIN2O95810 425 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 CXCL10P02778 98 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 GHRP10912 638 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 HOXD13P35453 343 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 CCL23P55773 120 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 KCNA1Q09470 495 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 PAK2Q13177 524 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 MBTPS1Q14703 1052 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 GPNMBQ14956 572 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 SLFN12LQ6IEE8 588 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 FOXR2Q6PJQ5 311 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 APBB2Q92870 758 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 BICD1Q96G01 975 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 FUCA2Q9BTY2 467 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 WNT8AQ9H1J5 351 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 AGO3Q9H9G7 860 aaKnown RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 TRAF3IP3Q9Y228 551 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 TNFSF13BQ9Y275 285 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
SHMT2-221ENST00000555773 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-221ENST00000555773 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 EVPLQ92817 2033 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 HNRNPDLO14979 420 aaKnown RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 NBNO60934 754 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 TOM1L1O75674 476 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 PFKMP08237 780 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 ZSCAN20P17040 1043 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 FGFR4P22455 802 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 CCNE1P24864 410 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 CD52P31358 61 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 LIG4P49917 911 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 MYBPC2Q14324 1141 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 ATF7IP2Q5U623 682 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 NOTUMQ6P988 496 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 NELFCDQ8IXH7 590 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 C7orf61Q8IZ16 206 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 SEPT8Q92599 483 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 SCLYQ96I15 445 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 KCTD10Q9H3F6 313 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 PTPRHQ9HD43 1115 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms