RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CAMK4Q16566 473 aa15.71■□□□□ 0.11
CHD8-208ENST00000555301 AMHR2Q16671 573 aa15.71■□□□□ 0.11
CHD8-208ENST00000555301 VWCEQ96DN2 955 aa15.71■□□□□ 0.11
CHD8-208ENST00000555301 AGPAT5Q9NUQ2 364 aa15.71■□□□□ 0.11
CHD8-208ENST00000555301 TBX20Q9UMR3 447 aa15.71■□□□□ 0.11
CHD8-208ENST00000555301 TRIP12Q14669 1992 aaPredicted RBP15.7■□□□□ 0.1
CHD8-208ENST00000555301 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 EIF3DO15371 548 aaKnown RBP eCLIP15.7■□□□□ 0.16e-7■■□□□ 13.8
CHD8-208ENST00000555301 TSPAN1O60635 241 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 BAIAP3O94812 1187 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 ACRP10323 421 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 NT5DC1Q5TFE4 455 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 CCDC51Q96ER9 411 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 STRA6Q9BX79 667 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
CHD8-208ENST00000555301 MTIF3Q9H2K0 278 aaKnown RBP15.7■□□□□ 0.1
CHD8-208ENST00000555301 KIAA1468Q9P260 1216 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 EXOC7Q9UPT5 735 aa15.7■□□□□ 0.1
CHD8-208ENST00000555301 PIN4Q9Y237 131 aaKnown RBP15.7■□□□□ 0.1
CHD8-208ENST00000555301 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 PPP1R37O75864 691 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 KIF20AO95235 890 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 MYBP10242 640 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 SARSP49591 514 aaKnown RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 STK4Q13043 487 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 TMEM132AQ24JP5 1023 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 ZC2HC1CQ53FD0 456 aaPredicted RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 TMEM240Q5SV17 173 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 NOTUMQ6P988 496 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 ZPBP2Q6X784 338 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 ZNF365Q70YC5 407 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 TAS1R3Q7RTX0 852 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 MAP4K3Q8IVH8 894 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 ERCC4Q92889 916 aaPredicted RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
CHD8-208ENST00000555301 ACCSQ96QU6 501 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 GDF15Q99988 308 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 TMX1Q9H3N1 280 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 PCDH10Q9P2E7 1040 aa15.69■□□□□ 0.1
CHD8-208ENST00000555301 UBE4BO95155 1302 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 A0A1B0GUA9 196 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 B4GALT5O43286 388 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 ARF4P18085 180 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 HOXA11P31270 313 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 CASP5P51878 434 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 EPHB4P54760 987 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 DSC3Q14574 896 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 CCDC183Q5T5S1 534 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 OTOP2Q7RTS6 562 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 APBB1IPQ7Z5R6 666 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 ZNF507Q8TCN5 953 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 BICD1Q96G01 975 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 ADAM2Q99965 735 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.14e-9■□□□□ 10.9
CHD8-208ENST00000555301 TRAIPQ9BWF2 469 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 RGS18Q9NS28 235 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 C1orf112Q9NSG2 853 aa15.68■□□□□ 0.1
CHD8-208ENST00000555301 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
CHD8-208ENST00000555301 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 HNRNPDLO14979 420 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 N4BP3O15049 544 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 PIGRP01833 764 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 SKIP12755 728 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 BMP8BP34820 402 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 LIG4P49917 911 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 NFKBIBQ15653 356 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 ZNF658Q5TYW1 1059 aaPredicted RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 ATF7IP2Q5U623 682 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 TWF2Q6IBS0 349 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 SLC27A1Q6PCB7 646 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 SLC24A5Q71RS6 500 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 MYOCDQ8IZQ8 938 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 KIAA0895Q8NCT3 520 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 SCFD1Q8WVM8 642 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 CPB2Q96IY4 423 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 ACO2Q99798 780 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 ADPGKQ9BRR6 497 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 UBE2OQ9C0C9 1292 aaKnown RBP15.67■□□□□ 0.1
CHD8-208ENST00000555301 MAN1B1Q9UKM7 699 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 TNFSF13BQ9Y275 285 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 EVPLQ92817 2033 aa15.67■□□□□ 0.1
CHD8-208ENST00000555301 ZBBXA8MT70 800 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 ENPP3O14638 875 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 MGEA5O60502 916 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms