RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 POTEMA6NI47 508 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 CHMP2AO43633 222 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 ZNF862O60290 1169 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 RFPL2O75678 378 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 GLUD1P00367 558 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 ALDH2P05091 517 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 GNA11P29992 359 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 CDC27P30260 824 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 CLK2P49760 499 aaKnown RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 DNM2P50570 870 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 RAB27AP51159 221 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 PFKFB3Q16875 520 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 CYP26C1Q6V0L0 522 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 GET4Q7L5D6 327 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 SUMF1Q8NBK3 374 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 FDXACB1Q9BRP7 624 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 INO80BQ9C086 356 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 SPATA6Q9NWH7 488 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 DLGAP2Q9P1A6 1054 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 SSX2IPQ9Y2D8 614 aa14.87□□□□□ -0.03
TUBB3-207ENST00000554927 KMT2BQ9UMN6 2715 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-207ENST00000554927 TEX28O15482 410 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
TUBB3-207ENST00000554927 LAMTOR5O43504 91 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 B4GALT3O60512 393 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 LRRN2O75325 713 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 DDHD2O94830 711 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 CYP3A4P08684 503 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 SPATA31D3P0C874 917 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 CPA1P15085 419 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 CDC42EP1Q00587 391 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 DRP2Q13474 957 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 SPATA31D4Q6ZUB0 917 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 FBXL16Q8N461 479 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 BICD2Q8TD16 824 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 PHKBQ93100 1093 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 SHDQ96IW2 340 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 RPS6KC1Q96S38 1066 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 TRAIPQ9BWF2 469 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 DISC1Q9NRI5 854 aa14.86□□□□□ -0.03
TUBB3-207ENST00000554927 FAM217BQ9NTX9 383 aaPredicted RBP14.86□□□□□ -0.03
TUBB3-207ENST00000554927 SEPT9Q9UHD8 586 aaPredicted RBP14.86□□□□□ -0.03
TUBB3-207ENST00000554927 CDV3Q9UKY7 258 aaKnown RBP14.86□□□□□ -0.03
TUBB3-207ENST00000554927 PRG3Q9Y2Y8 225 aaPredicted RBP14.86□□□□□ -0.03
TUBB3-207ENST00000554927 LILRB3O75022 631 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 POMCP01189 267 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 SOD2P04179 222 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 LAMP2P13473 410 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 GLULP15104 373 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 ATXN1P54253 815 aaKnown RBP14.85□□□□□ -0.03
TUBB3-207ENST00000554927 UGCGQ16739 394 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 MTERF2Q49AM1 385 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 KIAA0319Q5VV43 1072 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 RHPN2Q8IUC4 686 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 GPR161Q8N6U8 529 aaKnown RBP14.85□□□□□ -0.03
TUBB3-207ENST00000554927 CCDC148Q8NFR7 591 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 ATRIPQ8WXE1 791 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 TMEM175Q9BSA9 504 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 BCO2Q9BYV7 579 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.85□□□□□ -0.033e-7■■■□□ 15.4
TUBB3-207ENST00000554927 PCDHB2Q9Y5E7 798 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 NUMBLQ9Y6R0 609 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 SPTBN2O15020 2390 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 GPR179Q6PRD1 2367 aa14.85□□□□□ -0.03
TUBB3-207ENST00000554927 C2orf16Q68DN1 1984 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 ESYT2A0FGR8 921 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 NRP1O14786 923 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 SPTLC1O15269 473 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 ZNF623O75123 536 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 OR1G1P47890 313 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 GLUD2P49448 558 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 CSTF1Q05048 431 aaKnown RBP14.84□□□□□ -0.03
TUBB3-207ENST00000554927 ST3GAL2Q16842 350 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
TUBB3-207ENST00000554927 TAS1R1Q7RTX1 841 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 ZNF410Q86VK4 478 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 PALB2Q86YC2 1186 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 TRIM22Q8IYM9 498 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 REXO1Q8N1G1 1221 aaKnown RBP14.84□□□□□ -0.03
TUBB3-207ENST00000554927 HERC2P3Q9BVR0 1158 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 ZMYND12Q9H0C1 365 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 SLC2A4RGQ9NR83 387 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 KANSL3Q9P2N6 904 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 SUCLA2Q9P2R7 463 aaPredicted RBP14.84□□□□□ -0.03
TUBB3-207ENST00000554927 USP18Q9UMW8 372 aa14.84□□□□□ -0.03
TUBB3-207ENST00000554927 CPLX1O14810 134 aa14.83□□□□□ -0.04
TUBB3-207ENST00000554927 GAS7O60861 476 aa14.83□□□□□ -0.04
TUBB3-207ENST00000554927 AFF1P51825 1210 aaKnown RBP14.83□□□□□ -0.04
TUBB3-207ENST00000554927 JAK3P52333 1124 aa14.83□□□□□ -0.04
TUBB3-207ENST00000554927 LMNB2Q03252 620 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms