RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 ANKRD40Q6AI12 368 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TTI2Q6NXR4 508 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 FIGNL1Q6PIW4 674 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SLC51AQ86UW1 340 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 DNAAF5Q86Y56 855 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 C2CD5Q86YS7 1000 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MMGT1Q8N4V1 131 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 CSGALNACT2Q8N6G5 542 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 OTUD6BQ8N6M0 293 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 C19orf47Q8N9M1 422 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ST13P5Q8NFI4 369 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RASSF8Q8NHQ8 419 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PNMA5Q96PV4 448 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RUFY1Q96T51 708 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RNF26Q9BY78 433 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 IFIH1Q9BYX4 1025 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 TMEM60Q9H2L4 133 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SH2D4AQ9H788 454 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 EXOC1Q9NV70 894 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 MARK1Q9P0L2 795 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ARHGAP20Q9P2F6 1191 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 ASAP1Q9ULH1 1129 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 SUFUQ9UMX1 484 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 G3BP2Q9UN86 482 aaKnown RBP2.82□□□□□ -1.96
PRPF39-207ENST00000554439 RNF114Q9Y508 228 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHA13Q9Y5I0 950 aa2.82□□□□□ -1.96
PRPF39-207ENST00000554439 KCPQ6ZWJ8 1503 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 A0A1W2PQC6 194 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 FAM170AA1A519 330 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 IRS4O14654 1257 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MEFVO15553 781 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PRPF3O43395 683 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ADCY3O60266 1144 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ATP2C2O75185 946 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ASMTLO95671 621 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 FTCDO95954 541 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PDHBP11177 359 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 IMPDH2P12268 514 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 XBP1P17861 261 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 FGFR2P21802 821 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MTIF2P46199 727 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 DNM2P50570 870 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 VAV2P52735 878 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EPHB4P54760 987 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 DYNLL1P63167 89 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZBED6P86452 979 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 GUCY2DQ02846 1103 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MLLT1Q03111 559 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 GFPT1Q06210 699 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TROAPQ12815 778 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MAP3K12Q12852 859 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 STK4Q13043 487 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PUM3Q15397 648 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZYXQ15942 572 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC178Q5BJE1 867 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 NLRP10Q86W26 655 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 THNSL2Q86YJ6 484 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 SULF2Q8IWU5 870 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 DNAJC10Q8IXB1 793 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 AMOTL1Q8IY63 956 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 RAVER1Q8IY67 606 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KIRREL3Q8IZU9 778 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 C4orf32Q8N8J7 132 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 OR2W6PQ8NHA6 318 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF473Q8WTR7 871 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 BSNDQ8WZ55 320 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZKSCAN4Q969J2 545 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MTMR8Q96EF0 704 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ABHD17AQ96GS6 310 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CABS1Q96KC9 395 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 RPGRIP1Q96KN7 1286 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CNOT6LQ96LI5 555 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC42Q96M95 316 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TLR10Q9BXR5 811 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC4CQ9HCJ2 640 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EPB41L5Q9HCM4 733 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PPANQ9NQ55 473 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 DISC1Q9NRI5 854 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZNHIT6Q9NWK9 470 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 LRP2BPQ9P2M1 347 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MAGEC2Q9UBF1 373 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ABCF2Q9UG63 623 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TRMT112Q9UI30 125 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 SOX13Q9UN79 622 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TRPM3Q9HCF6 1732 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 LMTK3Q96Q04 1460 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ANO9A1A5B4 782 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 FRMD3A2A2Y4 597 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 E7EVH7 732 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 GFRA2O00451 464 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 OPA1O60313 960 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 DNAJA2O60884 412 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KIAA0754O94854 1291 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 HEXIM1O94992 359 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 IPO7O95373 1038 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC172P0C7W6 258 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EPB41P11171 864 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 NR1D1P20393 614 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CYP7A1P22680 504 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EEF1GP26641 437 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms