RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 TMEM240Q5SV17 173 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 CNKSR3Q6P9H4 555 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 RPUSD2Q8IZ73 545 aaKnown RBP20.29■□□□□ 0.84
PSEN1-210ENST00000554131 KIAA0895Q8NCT3 520 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 SLC17A8Q8NDX2 589 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 APBB2Q92870 758 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 PRIMPOLQ96LW4 560 aa20.29■□□□□ 0.84
PSEN1-210ENST00000554131 LBHD1Q9BQE6 289 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-210ENST00000554131 MRPL44Q9H9J2 332 aaKnown RBP20.29■□□□□ 0.84
PSEN1-210ENST00000554131 PRMT7Q9NVM4 692 aaPredicted RBP20.29■□□□□ 0.84
PSEN1-210ENST00000554131 CNTNAP2Q9UHC6 1331 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 K7ERI5 159 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 ACKR2O00590 384 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-210ENST00000554131 SCP2P22307 547 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 HOXD13P35453 343 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 KCNA1Q09470 495 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 NFX1Q12986 1120 aaKnown RBP20.28■□□□□ 0.84
PSEN1-210ENST00000554131 MAPK6Q16659 721 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 CATSPER4Q7RTX7 472 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 SEPT8Q92599 483 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 GSDMAQ96QA5 445 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.28■□□□□ 0.845e-12■□□□□ 10.8
PSEN1-210ENST00000554131 EXOC1Q9NV70 894 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 HOOK1Q9UJC3 728 aaKnown RBP20.28■□□□□ 0.84
PSEN1-210ENST00000554131 TBX20Q9UMR3 447 aa20.28■□□□□ 0.84
PSEN1-210ENST00000554131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-210ENST00000554131 H0YCG3 227 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 ABLIM1O14639 778 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 PSMD2Q13200 908 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 RBM43Q6ZSC3 357 aaKnown RBP20.27■□□□□ 0.84
PSEN1-210ENST00000554131 ZNF365Q70YC5 407 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 MAP4K3Q8IVH8 894 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 HVCN1Q96D96 273 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 NUP62CLQ9H1M0 184 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 IKZF4Q9H2S9 585 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 PRO3102Q9H379 93 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 SLC39A2Q9NP94 309 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 MAN1B1Q9UKM7 699 aa20.27■□□□□ 0.84
PSEN1-210ENST00000554131 PDE4DIPQ5VU43 2346 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 ZMYM2Q9UBW7 1377 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 GCNT3O95395 438 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 PIGRP01833 764 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 BMP6P22004 513 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 NFKBIBQ15653 356 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 BMT2Q1RMZ1 405 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
PSEN1-210ENST00000554131 RASIP1Q5U651 963 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 FAM43BQ6ZT52 329 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-210ENST00000554131 ZNF507Q8TCN5 953 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 SCFD1Q8WVM8 642 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 CPB2Q96IY4 423 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 ACO2Q99798 780 aaKnown RBP20.26■□□□□ 0.83
PSEN1-210ENST00000554131 TSPYL2Q9H2G4 693 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-210ENST00000554131 PTPRHQ9HD43 1115 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 CHST12Q9NRB3 414 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 KIAA1468Q9P260 1216 aa20.26■□□□□ 0.83
PSEN1-210ENST00000554131 A0A1B0GUA9 196 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 EIF3DO15371 548 aaKnown RBP eCLIP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 ERLIN2O94905 339 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PRPF6O94906 941 aaKnown RBP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 SMC2O95347 1197 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PTMSP20962 102 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PROZP22891 400 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 AXLP30530 894 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PRPF4BQ13523 1007 aaKnown RBP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 ALCAMQ13740 583 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 SLC39A4Q6P5W5 647 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 CRIPAKQ8N1N5 446 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 HERVK_113Q902F9 699 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 TARS2Q9BW92 718 aaKnown RBP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 FTHL17Q9BXU8 183 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PDZD7Q9H5P4 517 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 RGS18Q9NS28 235 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 PIN4Q9Y237 131 aaKnown RBP20.25■□□□□ 0.83
PSEN1-210ENST00000554131 GDAQ9Y2T3 454 aa20.25■□□□□ 0.83
PSEN1-210ENST00000554131 CEP290O15078 2479 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 ABHD14A-ACY1A0A1B0GW23 586 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 ENPP3O14638 875 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 BAIAP3O94812 1187 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 FGBP02675 491 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 ABCD1P33897 745 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 MORC3Q14149 939 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 C9orf50Q5SZB4 431 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 EEF1DP3Q658K8 133 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 OTOP2Q7RTS6 562 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 CDR2LQ86X02 465 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-210ENST00000554131 ADAM2Q99965 735 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
PSEN1-210ENST00000554131 HAPLN2Q9GZV7 340 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 CXXC1Q9P0U4 656 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-210ENST00000554131 PCDHB13Q9Y5F0 798 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 UBE4BO95155 1302 aa20.24■□□□□ 0.83
PSEN1-210ENST00000554131 COL4A6Q14031 1691 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms