RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LGALS4P56470 323 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 ERVFC1P60507 584 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 SNX17Q15036 470 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 PITRM1Q5JRX3 1037 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 SLFN12LQ6IEE8 588 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 PAQR3Q6TCH7 311 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 CATIPQ7Z7H3 387 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 CILP2Q8IUL8 1156 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 LILRA2Q8N149 483 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 ZNF277Q9NRM2 450 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-206ENST00000550987 UCKL1Q9NWZ5 548 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 DPP7Q9UHL4 492 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 CNTNAP1P78357 1384 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 SYCP2Q9BX26 1530 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 MUC3AQ02505 3323 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 ELL2O00472 640 aaPredicted RBP6.63□□□□□ -1.35
CPSF6-206ENST00000550987 MPOP05164 745 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 DBHP09172 617 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 PDCP20941 246 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 GALK1P51570 392 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 MOGSQ13724 837 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 SLC9A5Q14940 896 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 MBNL2Q5VZF2 373 aaKnown RBP6.63□□□□□ -1.35
CPSF6-206ENST00000550987 TSHZ1Q6ZSZ6 1077 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 NLRX1Q86UT6 975 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 CALML6Q8TD86 181 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 RPGRQ92834 1020 aaKnown RBP6.63□□□□□ -1.35
CPSF6-206ENST00000550987 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 SLC12A5Q9H2X9 1139 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 KCTD10Q9H3F6 313 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 IFT122Q9HBG6 1241 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 NUMBLQ9Y6R0 609 aa6.63□□□□□ -1.35
CPSF6-206ENST00000550987 ZFHX4Q86UP3 3567 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 ANO9A1A5B4 782 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 APAF1O14727 1248 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 DTNBO60941 627 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 PCDH8O95206 1070 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 HPXP02790 462 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 GDNFP39905 211 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 BCAR1P56945 870 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 SPIDRQ14159 915 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 NR1I3Q14994 352 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 LLGL1Q15334 1064 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 MUM1Q2TAK8 710 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 KIAA1841Q6NSI8 718 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 B3GNT9Q6UX72 402 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 C11orf96Q7Z7L8 435 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 TTLL11Q8NHH1 800 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 RSAD2Q8WXG1 361 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 HPS3Q969F9 1004 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 TOE1Q96GM8 510 aaKnown RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 TNIP3Q96KP6 325 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 ACO2Q99798 780 aaKnown RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 ACE2Q9BYF1 805 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
CPSF6-206ENST00000550987 CCDC39Q9UFE4 941 aa6.62□□□□□ -1.35
CPSF6-206ENST00000550987 RPRD2Q5VT52 1461 aaKnown RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 MYPNQ86TC9 1320 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 MSTNO14793 375 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 SRGAP3O43295 1099 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 FUT4P22083 530 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 AOAHP28039 575 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ALDH6A1Q02252 535 aaKnown RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 KCTD2Q14681 263 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 RAB3GAP1Q15042 981 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ZRSR2Q15696 482 aaKnown RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 TIGD5Q53EQ6 642 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ATAT1Q5SQI0 421 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ZBTB41Q5SVQ8 909 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 C10orf62Q5T681 223 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 CCDC149Q6ZUS6 474 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 SRGAP1Q7Z6B7 1085 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 RTN4RL1Q86UN2 441 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ZBTB34Q8NCN2 500 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 DIS3LQ8TF46 1054 aaKnown RBP6.61□□□□□ -1.35
CPSF6-206ENST00000550987 FATE1Q969F0 183 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 COA7Q96BR5 231 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 C1GALT1C1Q96EU7 318 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 FOXB1Q99853 325 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 STK32BQ9NY57 414 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 DNM3Q9UQ16 869 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 DAAM1Q9Y4D1 1078 aa6.61□□□□□ -1.35
CPSF6-206ENST00000550987 TMEM2Q9UHN6 1383 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 PRLP01236 227 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 PRNPP04156 253 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms