RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 MYMKA6NI61 221 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 H0YCG3 227 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 TLL1O43897 1013 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 SKIP12755 728 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-208ENST00000549995 ABCD1P33897 745 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 RABGGTBP53611 331 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 PEX3P56589 373 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-208ENST00000549995 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
PFDN5-208ENST00000549995 IQUBQ8NA54 791 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 SLC17A8Q8NDX2 589 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
PFDN5-208ENST00000549995 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 FAM105AQ9NUU6 356 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 SEL1LQ9UBV2 794 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
PFDN5-208ENST00000549995 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
PFDN5-208ENST00000549995 TDRD15B5MCY1 1934 aaKnown RBP13.13□□□□□ -0.31
PFDN5-208ENST00000549995 NPHP3-ACAD11A0A0J9YXS1 232 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 HOXA2O43364 376 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PPP1R37O75864 691 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 ERLIN2O94905 339 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 ARHGEF15O94989 841 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PIGRP01833 764 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PRKCBP05771 671 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 CA3P07451 260 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PFKFB1P16118 471 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PROZP22891 400 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 TAP1Q03518 808 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 EHHADHQ08426 723 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 MAPK6Q16659 721 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 DDX12PQ92771 950 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 C7orf25Q9BPX7 421 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
PFDN5-208ENST00000549995 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 ABLIM1O14639 778 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 POLR2DO15514 142 aaKnown RBP13.12□□□□□ -0.31
PFDN5-208ENST00000549995 B4GALT5O43286 388 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 MYOGP15173 224 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 GAP43P17677 238 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
PFDN5-208ENST00000549995 SMTNP53814 917 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 ERVK-21P61565 698 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 GTF2BQ00403 316 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
PFDN5-208ENST00000549995 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 PDILTQ8N807 584 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
PFDN5-208ENST00000549995 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
PFDN5-208ENST00000549995 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 SAMD11Q96NU1 681 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 PLXNA4Q9HCM2 1894 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 CITO14578 2027 aa13.12□□□□□ -0.31
PFDN5-208ENST00000549995 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 K7ERI5 159 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 N4BP3O15049 544 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 TBCAO75347 108 aaKnown RBP13.11□□□□□ -0.31
PFDN5-208ENST00000549995 FAM13AO94988 1023 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 MYL1P05976 194 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 AMPD3Q01432 767 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-208ENST00000549995 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
PFDN5-208ENST00000549995 RAD51AP2Q09MP3 1159 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 MAP4K3Q8IVH8 894 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 DHX58Q96C10 678 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
PFDN5-208ENST00000549995 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 ACO2Q99798 780 aaKnown RBP13.11□□□□□ -0.31
PFDN5-208ENST00000549995 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
PFDN5-208ENST00000549995 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms