RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 NRP1O14786 923 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 SGSM2O43147 1006 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ZNF623O75123 536 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 GLUD1P00367 558 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 POMCP01189 267 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 URODP06132 367 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ADH1AP07327 375 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 STARD6P59095 220 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 GPC5P78333 572 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 CDC42EP1Q00587 391 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 PRKCEQ02156 737 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 PRR16Q569H4 304 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 TTC22Q5TAA0 569 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 GET4Q7L5D6 327 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 GPR161Q8N6U8 529 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ATRIPQ8WXE1 791 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 CRYGNQ8WXF5 182 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 SHDQ96IW2 340 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 RPP25Q9BUL9 199 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 SLC2A4RGQ9NR83 387 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 DISC1Q9NRI5 854 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 BARHL2Q9NY43 387 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 SSX2IPQ9Y2D8 614 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
TRAFD1-206ENST00000549358 WDR64B1ANS9 1081 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 ANHXE9PGG2 379 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 ADAMTS3O15072 1205 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 SOD2P04179 222 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 DNM2P50570 870 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 RAB27AP51159 221 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 SNW1Q13573 536 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 HTR4Q13639 388 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 UGCGQ16739 394 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 PALB2Q86YC2 1186 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 PHKBQ93100 1093 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 BORCS6Q96GS4 357 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 TMEM175Q9BSA9 504 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 BCO2Q9BYV7 579 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 INO80BQ9C086 356 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 NT5C3AQ9H0P0 336 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 CDV3Q9UKY7 258 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 MTF2Q9Y483 593 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-206ENST00000549358 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 TMEM150BA6NC51 233 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 PRR5-ARHGAP8B1AHC4 643 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 SPTLC1O15269 473 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 CHMP2AO43633 222 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 GLUD2P49448 558 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 ARHGAP8P85298 464 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 FUT2Q10981 343 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 AAMPQ13685 434 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 TARBP2Q15633 366 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 MTERF2Q49AM1 385 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 RBM28Q9NW13 759 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 SUCLA2Q9P2R7 463 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 PRG3Q9Y2Y8 225 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
TRAFD1-206ENST00000549358 EP300Q09472 2414 aaPredicted RBP12.15□□□□□ -0.47
TRAFD1-206ENST00000549358 FAM170BA6NMN3 283 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 TGM5O43548 720 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 OR1G1P47890 313 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 LMNB2Q03252 620 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 UBXN2BQ14CS0 331 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 PARM1Q6UWI2 310 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 HDAC7Q8WUI4 952 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 FGF14Q92915 247 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 HERC2P3Q9BVR0 1158 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 NIFKQ9BYG3 293 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
TRAFD1-206ENST00000549358 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms