RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	CRY1	Q16526	586 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	INF2	Q27J81	1249 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	CLEC16A	Q2KHT3	1053 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	CCDC184	Q52MB2	194 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	TTLL7	Q6ZT98	887 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	CHST15	Q7LFX5	561 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	OTOP1	Q7RTM1	612 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	FAM186B	Q8IYM0	893 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	CPXCR1	Q8N123	301 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	NGEF	Q8N5V2	710 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ANKS4B	Q8N8V4	417 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ZBTB34	Q8NCN2	500 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	NGDN	Q8NEJ9	315 aa	Known RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	JADE3	Q92613	823 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	CHAMP1	Q96JM3	812 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102		Q96M66	194 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ELF4	Q99607	663 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	KCNJ15	Q99712	375 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ACO2	Q99798	780 aa	Known RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	SENP7	Q9BQF6	1050 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	HERPUD2	Q9BSE4	406 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	BOC	Q9BWV1	1114 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	NAA15	Q9BXJ9	866 aa	Known RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ZNF552	Q9H707	407 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	ANAPC4	Q9UJX5	808 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	FBXO9	Q9UK97	447 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	LZTS1	Q9Y250	596 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	PTPN22	Q9Y2R2	807 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	PCDHA11	Q9Y5I1	949 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	MSH6	P52701	1360 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	COL3A1	P02461	1466 aa	Predicted RBP	4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	IQSEC2	Q5JU85	1478 aa		4.24	□□□□□ -1.73
CUL3-215	ENST00000546102	SSH2	Q76I76	1423 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	STRCP1	A6NGW2	1772 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	RGPD8	O14715	1765 aa	Predicted RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SLC12A8	A0AV02	714 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	KLRG2	A4D1S0	409 aa	Predicted RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	OR14I1	A6ND48	311 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	WASH4P	A8MWX3	477 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	DVL2	O14641	736 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	FYB1	O15117	783 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	KDM1A	O60341	852 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PQBP1	O60828	265 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	GSTM1	P09488	218 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SETSIP	P0DME0	302 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SLC5A1	P13866	664 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PDE6A	P16499	860 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PAM	P19021	973 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ALDH5A1	P51649	535 aa	Predicted RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	HSPA2	P54652	639 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	JAM2	P57087	298 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PHC1	P78364	1004 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SMAD3	P84022	425 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	IRF9	Q00978	393 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PDCD1	Q15116	288 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ZNF174	Q15697	407 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SMAD2	Q15796	467 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	GAB4	Q2WGN9	574 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	OLFML2B	Q68BL8	750 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	MBLAC2	Q68D91	279 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	IQCE	Q6IPM2	695 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	CCDC149	Q6ZUS6	474 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	OSTM1	Q86WC4	334 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ZNF354C	Q86Y25	554 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	MIER2	Q8N344	545 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	KIAA1958	Q8N8K9	716 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	FAM156A	Q8NDB6	213 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ACRBP	Q8NEB7	543 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PANK1	Q8TE04	598 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SCLT1	Q96NL6	688 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SLC12A9	Q9BXP2	914 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	HDAC8	Q9BY41	377 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	GTPBP4	Q9BZE4	634 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ZDHHC5	Q9C0B5	715 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	CSRNP2	Q9H175	543 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	TMX4	Q9H1E5	349 aa	Predicted RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	PNN	Q9H307	717 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	NGRN	Q9NPE2	291 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	DNAJC28	Q9NX36	388 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SIRT5	Q9NXA8	310 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	FNIP2	Q9P278	1114 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	FBXL7	Q9UJT9	491 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	NUDC	Q9Y266	331 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	LAS1L	Q9Y4W2	734 aa	Known RBP	4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	SPO11	Q9Y5K1	396 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	IRAK3	Q9Y616	596 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	RTL1	A6NKG5	1358 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	TMEM94	Q12767	1356 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	C1orf167	Q5SNV9	1468 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	ADAMTS20	P59510	1910 aa		4.23	□□□□□ -1.73
CUL3-215	ENST00000546102	TTC21B	Q7Z4L5	1316 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MST1R	Q04912	1400 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MYOCOS	A0A1B0GUC4	107 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	ZNF561-AS1	K7EIQ3	104 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MYO1B	O43795	1136 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms