RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KRT37O76014 449 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 GGCXP38435 758 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 KCNB1Q14721 858 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 SIK2Q9H0K1 926 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 E9PCH4 1651 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 KLRK1P26718 216 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 TMPRSS15P98073 1019 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 STK4Q13043 487 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 PDE1CQ14123 709 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 DUOXA2Q1HG44 320 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 COPEO14579 308 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 MMEP08473 750 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 HIBCHQ6NVY1 386 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 TRIM59Q8IWR1 403 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 Q9H521 79 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 JCADQ9P266 1359 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 CPS1P31327 1500 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 GGPS1O95749 300 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 GPS1Q13098 491 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 CC2D1AQ6P1N0 951 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 GANCQ8TET4 914 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 AFG1LQ8WV93 481 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 WDR24Q96S15 920 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 FSD1LQ9BXM9 530 aa13.64□□□□□ -0.23
CHD4-211ENST00000544484 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
CHD4-211ENST00000544484 GNGT2O14610 69 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 HABP4Q5JVS0 413 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 TTC13Q8NBP0 860 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 DHX35Q9H5Z1 703 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 CPSF2Q9P2I0 782 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 KIF3CO14782 793 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 ESRRAP11474 423 aaPredicted RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 VPS39Q96JC1 886 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 MYMKA6NI61 221 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 VPS11Q9H270 941 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 CAPN11Q9UMQ6 739 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 STXBP3O00186 592 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 FDX1P10109 184 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 OCRLQ01968 901 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 C1orf228Q6PIY5 440 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 FRMD5Q7Z6J6 570 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 RMDN2Q96LZ7 410 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 NOC2LQ9Y3T9 749 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 A0A1W2PQC6 194 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 PSMD14O00487 310 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 PDXKO00764 312 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 KRT10P13645 584 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 MAGOHP61326 146 aaKnown RBP13.63□□□□□ -0.23
CHD4-211ENST00000544484 ART3Q13508 389 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 PPM1NQ8N819 430 aa13.63□□□□□ -0.23
CHD4-211ENST00000544484 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.232e-8■□□□□ 11.3
CHD4-211ENST00000544484 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 HSPA4LO95757 839 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 PRKCBP05771 671 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 MX2P20592 715 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 CACNB2Q08289 660 aaPredicted RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 PLA2G4FQ68DD2 849 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 HIPK4Q8NE63 616 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 HSPBP1Q9NZL4 362 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 POLRMTO00411 1230 aaKnown RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 BCAR1P56945 870 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 NSUN2Q08J23 767 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD4-211ENST00000544484 DPYDQ12882 1025 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 ZC3H18Q86VM9 953 aaKnown RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 AGPAT5Q9NUQ2 364 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 EPS15L1Q9UBC2 864 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 IP6K2Q9UHH9 426 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 MYBP10242 640 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 AP1B1Q10567 949 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 KLC3Q6P597 504 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 CCDC137Q6PK04 289 aaKnown RBP13.62□□□□□ -0.23
CHD4-211ENST00000544484 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 HVCN1Q96D96 273 aa13.62□□□□□ -0.23
CHD4-211ENST00000544484 LCP1P13796 627 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms