RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RASA1P20936 1047 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 GNAQP50148 359 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 MTFR1Q15390 333 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PARP6Q2NL67 630 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
SMG8-202ENST00000543872 IRGCQ6NXR0 463 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 MRRFQ96E11 262 aaKnown RBP13.59□□□□□ -0.23
SMG8-202ENST00000543872 BICD1Q96G01 975 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PHACTR1Q9C0D0 580 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 CARD9Q9H257 536 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 IL17RBQ9NRM6 502 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 MAPK13O15264 365 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 TAC1P20366 129 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 GSTT1P30711 240 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 STAT1P42224 750 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 LNX1Q8TBB1 728 aaPredicted RBP13.59□□□□□ -0.23
SMG8-202ENST00000543872 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 DNAJC19Q96DA6 116 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 hCG_2014768A0A024R1R8 64 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 FAM196BA6NMK8 535 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 MYBPC3Q14896 1274 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 CCDC65Q8IXS2 484 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 RFFLQ8WZ73 363 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 USP40Q9NVE5 1235 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 TAS2R14Q9NYV8 317 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 GCNT4Q9P109 453 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ASIC3Q9UHC3 531 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ALG6Q9Y672 507 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 MYH3P11055 1940 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 E7ENQ6 273 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ABLIM1O14639 778 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 STARD3NLO95772 234 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 VHLP40337 213 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 TNNI2P48788 182 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 CHRNDQ07001 517 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 GALNT17Q6IS24 598 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ARHGEF18Q6ZSZ5 1173 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 TMEM109Q9BVC6 243 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 RGPD5Q99666 1765 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 PODXLO00592 558 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 CLIC2O15247 247 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 KRT36O76013 467 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ETS2P15036 469 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 GNA11P29992 359 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 CHRNA3P32297 505 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 MESDQ14696 234 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ARHGAP44Q17R89 818 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 MAGEB18Q96M61 343 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 NDNQ99608 321 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 CRNKL1Q9BZJ0 848 aaKnown RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 ROPN1BQ9BZX4 212 aaPredicted RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 ROPN1Q9HAT0 212 aaPredicted RBP13.58□□□□□ -0.24
SMG8-202ENST00000543872 KIAA1024Q9UPX6 916 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 LRCH1Q9Y2L9 728 aa13.58□□□□□ -0.24
SMG8-202ENST00000543872 THAP12O43422 761 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 TNFAIP3P21580 790 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 ATP5DP30049 168 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 GRM4Q14833 912 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 USP17L2Q6R6M4 530 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 PRUNE1Q86TP1 453 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
SMG8-202ENST00000543872 LRRC27Q9C0I9 530 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
SMG8-202ENST00000543872 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 CAPN9O14815 690 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 ATP5HO75947 161 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 CHKAP35790 457 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 RASSF2P50749 326 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 IL9RQ01113 521 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 STRN3Q13033 797 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 DSTYKQ6XUX3 929 aa13.57□□□□□ -0.24
SMG8-202ENST00000543872 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms