RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DHX8Q14562 1220 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 MCM6Q14566 821 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 STK38Q15208 465 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 PPP4R3CPQ6ZMV5 832 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 AGMOQ6ZNB7 445 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 ZBTB8OSQ8IWT0 167 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 SMG8Q8ND04 991 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 DEPTORQ8TB45 409 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 IFT74Q96LB3 600 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 C2orf40Q9H1Z8 148 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 RWDD3Q9Y3V2 267 aa20.22■□□□□ 0.83
SNRPA1-203ENST00000540017 SPTLC2O15270 562 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 GRM6O15303 877 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 RB1P06400 928 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 SKIP12755 728 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 NPTX2P47972 431 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 PEX3P56589 373 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 PPP2R5AQ15172 486 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 FAM187BQ17R55 369 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 RAD54LQ92698 747 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 RNF39Q9H2S5 420 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 PRDM6Q9NQX0 595 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 PRMT7Q9NVM4 692 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 UNC80Q8N2C7 3258 aa20.21■□□□□ 0.83
SNRPA1-203ENST00000540017 A0A087X0B3 334 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 A0A1B0GUA9 196 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 OFD1O75665 1012 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 BRD1O95696 1058 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 ITGB1P05556 798 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 PRKCBP05771 671 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 LIG1P18858 919 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 AFF1P51825 1210 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 GPBP1Q86WP2 473 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 KLHL23Q8NBE8 558 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 CHAMP1Q96JM3 812 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 C11orf84Q9BUA3 381 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 PLVAPQ9BX97 442 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 ALG13Q9NP73 1137 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 LMCD1Q9NZU5 365 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 HES2Q9Y543 173 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 IPPQ9Y573 584 aa20.2■□□□□ 0.82
SNRPA1-203ENST00000540017 CCDC169A6NNP5 214 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 YEATS4O95619 227 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 PBX3P40426 434 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 DNM1Q05193 864 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 MAPK6Q16659 721 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 NAALADL2Q58DX5 795 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 SPOUT1Q5T280 376 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 TAS1R3Q7RTX0 852 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 P2RX5Q93086 422 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 MRPL38Q96DV4 380 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 CCDC51Q96ER9 411 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 TIPINQ9BVW5 301 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 PLAGL2Q9UPG8 496 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 CNTNAP2Q9UHC6 1331 aa20.19■□□□□ 0.82
SNRPA1-203ENST00000540017 ACKR2O00590 384 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 SLC16A4O15374 487 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 PPP6R2O75170 966 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 NPTXRO95502 500 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 DNAJB1P25685 340 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 DDIT3P35638 169 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 EFNA5P52803 228 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 PRPF4BQ13523 1007 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 CAMK1Q14012 370 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 EEF1DP3Q658K8 133 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 SLC27A1Q6PCB7 646 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 LRRC43Q8N309 656 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 SPPL3Q8TCT6 385 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 LARP4BQ92615 738 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 PGBD4Q96DM1 585 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 REEP2Q9BRK0 252 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 NXF3Q9H4D5 531 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 PDZD7Q9H5P4 517 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 KMT5AQ9NQR1 393 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 KCND2Q9NZV8 630 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 ARHGAP28Q9P2N2 729 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 INPP5FQ9Y2H2 1132 aa20.18■□□□□ 0.82
SNRPA1-203ENST00000540017 ATG2AQ2TAZ0 1938 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 B4GALT3O60512 393 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 PLS3P13797 630 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 DMP1Q13316 513 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 NOMO2Q5JPE7 1267 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 GLB1LQ6UWU2 654 aa20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-203ENST00000540017 RSAD1Q9HA92 442 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms