RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 RDH13Q8NBN7 331 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 SPIRE2Q8WWL2 714 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 CBWD1Q9BRT8 395 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 KATNBL1Q9H079 304 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
PCDHB17P-201ENST00000539533 LGR5O75473 907 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC10A3P09131 477 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 ADCYAP1R1P41586 468 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 ZBED6P86452 979 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 APBA1Q02410 837 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 WDR59Q6PJI9 974 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SRLQ86TD4 932 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC35C1Q96A29 364 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 ZBTB9Q96C00 473 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 VTA1Q9NP79 307 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 EXOC3O60645 756 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 RTP1P59025 263 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 ARHGAP1Q07960 439 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 IFNL1Q8IU54 200 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC9A9Q8IVB4 645 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC17A8Q8NDX2 589 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 ZSWIM2Q8NEG5 633 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 SLC7A3Q8WY07 619 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 FRMD4BQ9Y2L6 1034 aa18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 REXO2Q9Y3B8 237 aaKnown RBP18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 RRP15Q9Y3B9 282 aaKnown RBP18.6■□□□□ 0.57
PCDHB17P-201ENST00000539533 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 A0A1W2PQJ5 194 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 NDUFA10O95299 355 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 MKNK1Q9BUB5 465 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 FAM155AB1AL88 458 aaPredicted RBP18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 ANKRD63C9JTQ0 380 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 WDR93Q6P2C0 686 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 PLPPR4Q7Z2D5 763 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 ASAP3Q8TDY4 903 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 IFT74Q96LB3 600 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 ZIC5Q96T25 663 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 TINF2Q9BSI4 451 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 GPBP1L1Q9HC44 474 aaPredicted RBP18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
PCDHB17P-201ENST00000539533 DOCK3Q8IZD9 2030 aa18.58■□□□□ 0.57
PCDHB17P-201ENST00000539533 RBM47A0AV96 593 aaKnown RBP18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 SLC15A5A6NIM6 579 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 NOL4O94818 638 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 DRP2Q13474 957 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 LEKR1Q6ZMV7 388 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 MAP4K3Q8IVH8 894 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 LSM14BQ9BX40 385 aaKnown RBP18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRIM10Q9UDY6 481 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 ABT1Q9ULW3 272 aaKnown RBP18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 GUCA1BQ9UMX6 200 aa18.58■□□□□ 0.56
PCDHB17P-201ENST00000539533 GLRA2P23416 452 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 ADSSP30520 456 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 ARL2P36404 184 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 NOP2P46087 812 aaKnown RBP18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 PLCB4Q15147 1175 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 TSR1Q2NL82 804 aaKnown RBP18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 HSP90B2PQ58FF3 399 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 TAS1R3Q7RTX0 852 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRAPPC11Q7Z392 1133 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 FAM71BQ8TC56 605 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 CCDC102AQ96A19 550 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 TLR2O60603 784 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 CNGA1P29973 690 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 MYBPC2Q14324 1141 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 C17orf99Q6UX52 265 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 ATP8B4Q8TF62 1192 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 FAM167AQ96KS9 214 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 HSPBP1Q9NZL4 362 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 ARHGAP28Q9P2N2 729 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 EXOC7Q9UPT5 735 aa18.57■□□□□ 0.56
PCDHB17P-201ENST00000539533 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 ZBTB42B2RXF5 422 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 MAFO75444 373 aaPredicted RBP18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 SLC9A1P19634 815 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 RFC5P40937 340 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 GRM1Q13255 1194 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 MORN1Q5T089 497 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 GPIHBP1Q8IV16 184 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 C12orf56Q8IXR9 622 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 BAP1Q92560 729 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 IQCDQ96DY2 449 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 ACBD3Q9H3P7 528 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 SMARCAD1Q9H4L7 1026 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 NLRC4Q9NPP4 1024 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 GH1P01241 217 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRIM49P0CI25 452 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 TRIM49CP0CI26 452 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 ACTN1P12814 892 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 INHBEP58166 350 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 MEA1Q16626 185 aa18.56■□□□□ 0.56
PCDHB17P-201ENST00000539533 SLC39A4Q6P5W5 647 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms