RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 GRAMD1AQ96CP6 724 aa18.52■□□□□ 0.56
C2CD3-213ENST00000539061 BORCS6Q96GS4 357 aa18.52■□□□□ 0.56
C2CD3-213ENST00000539061 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
C2CD3-213ENST00000539061 CTTNBP2NLQ9P2B4 639 aa18.52■□□□□ 0.56
C2CD3-213ENST00000539061 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.52■□□□□ 0.56
C2CD3-213ENST00000539061 LRRC42Q9Y546 428 aa18.52■□□□□ 0.56
C2CD3-213ENST00000539061 ANKRD63C9JTQ0 380 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 STX2P32856 288 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 ITPK1Q13572 414 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 CATSPER3Q86XQ3 398 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 DDX23Q9BUQ8 820 aaKnown RBP18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PTPN22Q9Y2R2 807 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 GCNT3O95395 438 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 ACSL3O95573 720 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PSMC2P35998 433 aaKnown RBP18.51■□□□□ 0.55
C2CD3-213ENST00000539061 ACVR2BQ13705 512 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
C2CD3-213ENST00000539061 FAM186BQ8IYM0 893 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 RPS6KC1Q96S38 1066 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 COL14A1Q05707 1796 aaKnown RBP18.51■□□□□ 0.55
C2CD3-213ENST00000539061 E7ENQ6 273 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PPP1R11O60927 126 aaPredicted RBP18.51■□□□□ 0.55
C2CD3-213ENST00000539061 ATP5HO75947 161 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 BRAFP15056 766 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 GNAZP19086 355 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 MARCKSL1P49006 195 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 INHBEP58166 350 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PSMC6P62333 389 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 PARP6Q2NL67 630 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 MAGEB18Q96M61 343 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 RNPEPL1Q9HAU8 725 aa18.51■□□□□ 0.55
C2CD3-213ENST00000539061 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 FAM170AA1A519 330 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 TMEM110-MUSTN1A8MSY1 372 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ATP4AP20648 1035 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 FMO5P49326 533 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 MGAT5Q09328 741 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 RBBP5Q15291 538 aaKnown RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 MTFR1Q15390 333 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 GRIK5Q16478 980 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ARHGEF18Q6ZSZ5 1173 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ERMNQ8TAM6 284 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ZBTB10Q96DT7 871 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 GPR88Q9GZN0 384 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 KLHL33A6NCF5 533 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 MEIS1O00470 390 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 HGSO14964 777 aaPredicted RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 FESP07332 822 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 CALB2P22676 271 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 PEX5P50542 639 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 LMNB2Q03252 620 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ECHDC2Q86YB7 292 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 PALB2Q86YC2 1186 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 PARD3BQ8TEW8 1205 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 UTP4Q969X6 686 aaKnown RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 MTMR4Q9NYA4 1195 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
C2CD3-213ENST00000539061 FRMPD4Q14CM0 1322 aa18.5■□□□□ 0.55
C2CD3-213ENST00000539061 AHCYL1O43865 530 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 BTDP43251 543 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 MPP2Q14168 576 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 TRIM68Q6AZZ1 485 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 CGB2Q6NT52 195 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 LMNTD2Q8IXW0 634 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 WNT8AQ9H1J5 351 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 NKX1-2Q9UD57 310 aaPredicted RBP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 ECEL1O95672 775 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 GH1P01241 217 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 NEFHP12036 1026 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 KCNJ1P48048 391 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 TCEAL1Q15170 157 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 INTS8Q75QN2 995 aaKnown RBP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 SLC13A5Q86YT5 568 aaPredicted RBP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 AGGF1Q8N302 714 aaeCLIP18.49■□□□□ 0.55
C2CD3-213ENST00000539061 AGPAT1Q99943 283 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 NKIRAS1Q9NYS0 192 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 WHRNQ9P202 907 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 APEX2Q9UBZ4 518 aa18.49■□□□□ 0.55
C2CD3-213ENST00000539061 IRS2Q9Y4H2 1338 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 ANKRD33BA6NCL7 494 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 RSPH10B2B2RC85 870 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 MPHOSPH10O00566 681 aaKnown RBP18.48■□□□□ 0.55
C2CD3-213ENST00000539061 RSPH10BP0C881 870 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 PYGMP11217 842 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 COMTP21964 271 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 RWDD2BP57060 319 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 KCNA1Q09470 495 aa18.48■□□□□ 0.55
C2CD3-213ENST00000539061 CTTNQ14247 550 aaKnown RBP18.48■□□□□ 0.55
C2CD3-213ENST00000539061 KIF22Q14807 665 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms