RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MAPTP10636 758 aaKnown RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 FGFR1P11362 822 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 ACTN1P12814 892 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 IBSPP21815 317 aaPredicted RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 AFMP43652 599 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 AFF1P51825 1210 aaKnown RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 HTRA4P83105 476 aaPredicted RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 KCNA1Q09470 495 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 ZC2HC1CQ53FD0 456 aaPredicted RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 SLC39A4Q6P5W5 647 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 SV2BQ7L1I2 683 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 SMG8Q8ND04 991 aaKnown RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 LPPQ93052 612 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 TOP1MTQ969P6 601 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 SLC9A7Q96T83 725 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 STRA6Q9BX79 667 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 TNMDQ9H2S6 317 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 TTYH1Q9H313 450 aaPredicted RBP14.45□□□□□ -0.1
CHFR-216ENST00000538235 PDZD7Q9H5P4 517 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 KCND2Q9NZV8 630 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 TBC1D7Q9P0N9 293 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 ZMYM2Q9UBW7 1377 aa14.45□□□□□ -0.1
CHFR-216ENST00000538235 MYO9BQ13459 2157 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 PHLPP2Q6ZVD8 1323 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 CCDC169A6NNP5 214 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 NR1I2O75469 434 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 UPP2O95045 317 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHFR-216ENST00000538235 FAM189BP81408 668 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 COASYQ13057 564 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 TFDP1Q14186 410 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 FAM187BQ17R55 369 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 CLLU1OSQ5K130 101 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 ECHDC2Q86YB7 292 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 CEP120Q8N960 986 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 SPIRE2Q8WWL2 714 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 ERCC4Q92889 916 aaPredicted RBP14.44□□□□□ -0.1
CHFR-216ENST00000538235 ZNF689Q96CS4 500 aaPredicted RBP14.44□□□□□ -0.1
CHFR-216ENST00000538235 PAGE5Q96GU1 130 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 DRC1Q96MC2 740 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 NTPCRQ9BSD7 190 aaKnown RBP14.44□□□□□ -0.1
CHFR-216ENST00000538235 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 HES2Q9Y543 173 aa14.44□□□□□ -0.1
CHFR-216ENST00000538235 EPOPA6NHQ4 379 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 FAM13AO94988 1023 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 CA3P07451 260 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 SLFN14P0C7P3 912 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 MYBP10242 640 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 DNAJB2P25686 324 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 HOXD13P35453 343 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 SYKP43405 635 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 KCNJ6P48051 423 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 SARSP49591 514 aaKnown RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 DMP1Q13316 513 aaPredicted RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 ODR4Q5SWX8 454 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 CNNM4Q6P4Q7 775 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 KRBA2Q6ZNG9 492 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 Q7L0L9 218 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 TMEM130Q8N3G9 435 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 IQUBQ8NA54 791 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 SP7Q8TDD2 431 aaPredicted RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 KCNN1Q92952 543 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 ZBTB45Q96K62 511 aaPredicted RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 C7orf25Q9BPX7 421 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 TIPINQ9BVW5 301 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 TARS2Q9BW92 718 aaKnown RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
CHFR-216ENST00000538235 PARVGQ9HBI0 331 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 KMT5AQ9NQR1 393 aa14.43□□□□□ -0.1
CHFR-216ENST00000538235 DENND3A2RUS2 1198 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 K7ENM7 598 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 DGKIO75912 1065 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 ZNF202O95125 648 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 AMHP03971 560 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 PROZP22891 400 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
CHFR-216ENST00000538235 CDC42EP1Q00587 391 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 PPP2R5AQ15172 486 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 AGMOQ6ZNB7 445 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 HAUS6Q7Z4H7 955 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 TMEM192Q8IY95 271 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 MYCT1Q8N699 235 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 IFT74Q96LB3 600 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 TRAIPQ9BWF2 469 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 FTHL17Q9BXU8 183 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 CUEDC2Q9H467 287 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 PTPRHQ9HD43 1115 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 FAM105AQ9NUU6 356 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 EYSQ5T1H1 3165 aa14.42□□□□□ -0.1
CHFR-216ENST00000538235 VWA8A3KMH1 1905 aa14.41□□□□□ -0.1
CHFR-216ENST00000538235 A0A0U1RQF3 1178 aa14.41□□□□□ -0.1
CHFR-216ENST00000538235 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.41□□□□□ -0.1
CHFR-216ENST00000538235 A0A1B0GUA9 196 aa14.41□□□□□ -0.1
CHFR-216ENST00000538235 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms