RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 KCNT2Q6UVM3 1135 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 DTHD1Q6ZMT9 781 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 DAW1Q8N136 415 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 MCPH1Q8NEM0 835 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 BCL7CQ8WUZ0 217 aaPredicted RBP18.17■□□□□ 0.5
ATL3-202ENST00000535789 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 RUSC1Q9BVN2 902 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 CCDC113Q9H0I3 377 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 TBC1D13Q9NVG8 400 aa18.17■□□□□ 0.5
ATL3-202ENST00000535789 VWA3AA6NCI4 1184 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 LRRIQ4A6NIV6 560 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 FSCN2O14926 492 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 TBX10O75333 385 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 ERLIN2O94905 339 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 SYT1P21579 422 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 MAPK7Q13164 816 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 TFDP1Q14186 410 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 CTC1Q2NKJ3 1217 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 HYIQ5T013 277 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 ABI1Q8IZP0 508 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 SLC39A11Q8N1S5 342 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.16■□□□□ 0.5
ATL3-202ENST00000535789 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
ATL3-202ENST00000535789 DNAJB4Q9UDY4 337 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 USP20Q9Y2K6 914 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 HES2Q9Y543 173 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 IPPQ9Y573 584 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 PCDHB12Q9Y5F1 795 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 C2orf16Q68DN1 1984 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 ANK1P16157 1881 aa18.16■□□□□ 0.5
ATL3-202ENST00000535789 NT5C1B-RDH14C9J2C7 533 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 EYA4O95677 639 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 GLP2RO95838 553 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
ATL3-202ENST00000535789 KCNA5P22460 613 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 THNSL1Q8IYQ7 743 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 INTS4Q96HW7 963 aaKnown RBP18.15■□□□□ 0.5
ATL3-202ENST00000535789 NXF3Q9H4D5 531 aaKnown RBP18.15■□□□□ 0.5
ATL3-202ENST00000535789 NRDE2Q9H7Z3 1164 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 INPP5FQ9Y2H2 1132 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 DENND4AQ7Z401 1863 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
ATL3-202ENST00000535789 TRIOO75962 3097 aa18.14■□□□□ 0.5
ATL3-202ENST00000535789 H3BQ06 376 aaPredicted RBP18.14■□□□□ 0.49
ATL3-202ENST00000535789 AXLP30530 894 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
ATL3-202ENST00000535789 PLCB3Q01970 1234 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 PTPAQ15257 358 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 TMEM119Q4V9L6 283 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 NOMO2Q5JPE7 1267 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 KRT79Q5XKE5 535 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 ARL6IP4Q66PJ3 421 aaKnown RBP18.14■□□□□ 0.49
ATL3-202ENST00000535789 NOTUMQ6P988 496 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 ZNF280BQ86YH2 543 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 VN1R2Q8NFZ6 395 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 VN1R3Q9BXE9 311 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 MRPL9Q9BYD2 267 aaKnown RBP18.14■□□□□ 0.49
ATL3-202ENST00000535789 RAB34Q9BZG1 259 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 CSRNP2Q9H175 543 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 FZD8Q9H461 694 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 TLR9Q9NR96 1032 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 AAASQ9NRG9 546 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 MTMR6Q9Y217 621 aa18.14■□□□□ 0.49
ATL3-202ENST00000535789 TCHHQ07283 1943 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATL3-202ENST00000535789 DDHD2O94830 711 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 SKIP12755 728 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 IL9P15248 144 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 BCAR1P56945 870 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 UBE3AQ05086 875 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 PCBP1Q15365 356 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATL3-202ENST00000535789 SF3A1Q15459 793 aaKnown RBP18.13■□□□□ 0.49
ATL3-202ENST00000535789 LEXMQ3ZCV2 418 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 C1orf186Q6ZWK4 172 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
ATL3-202ENST00000535789 PLIN2Q99541 437 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 PDZD7Q9H5P4 517 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 CLIC4Q9Y696 253 aa18.13■□□□□ 0.49
ATL3-202ENST00000535789 MTCL1Q9Y4B5 1905 aaKnown RBP18.13■□□□□ 0.49
ATL3-202ENST00000535789 A0A1B0GUA9 196 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 HIDE1A8MVS5 230 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 INPPL1O15357 1258 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 HIP1RO75146 1068 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 NPTXRO95502 500 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 NAMPTP43490 491 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 SLC11A1P49279 550 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 RINT1Q6NUQ1 792 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 GLB1LQ6UWU2 654 aa18.12■□□□□ 0.49
ATL3-202ENST00000535789 TAS1R3Q7RTX0 852 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms