RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NRN1LQ496H8 165 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 FKBP15Q5T1M5 1219 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 PIK3C3Q8NEB9 887 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 OR5M3Q8NGP4 307 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 AHCYL2Q96HN2 611 aaKnown RBP7.05□□□□□ -1.28
PRKDC-205ENST00000535375 FDXACB1Q9BRP7 624 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-205ENST00000535375 EVLQ9UI08 416 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-205ENST00000535375 SH3BP1Q9Y3L3 701 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 CADPSQ9ULU8 1353 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 ELAVL1Q15717 326 aaKnown RBP7.04□□□□□ -1.28
PRKDC-205ENST00000535375 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.04□□□□□ -1.28
PRKDC-205ENST00000535375 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 TAS1R1Q7RTX1 841 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 MIEF2Q96C03 454 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 PAWRQ96IZ0 340 aaKnown RBP7.04□□□□□ -1.28
PRKDC-205ENST00000535375 EDARQ9UNE0 448 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
PRKDC-205ENST00000535375 A0A1W2PR48 441 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 PRAMEF4O60810 478 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 LTA4HP09960 611 aaKnown RBP7.03□□□□□ -1.28
PRKDC-205ENST00000535375 MTHFD2P13995 350 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 DUSP2Q05923 314 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 CRHR2Q13324 411 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 UBE3CQ15386 1083 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 USP39Q53GS9 565 aaKnown RBP7.03□□□□□ -1.28
PRKDC-205ENST00000535375 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 LYSMD2Q8IV50 215 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 TGFBRAP1Q8WUH2 860 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 PRDM12Q9H4Q4 367 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
PRKDC-205ENST00000535375 MFAP3LO75121 409 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 GNAT2P19087 354 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 ACRV1P26436 265 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 CDK17Q00537 523 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 MEF2AQ02078 507 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-205ENST00000535375 SLC41A1Q8IVJ1 513 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 C1orf210Q8IVY1 113 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 ZNF512Q96ME7 567 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-205ENST00000535375 QRSL1Q9H0R6 528 aaKnown RBP7.02□□□□□ -1.29
PRKDC-205ENST00000535375 VTA1Q9NP79 307 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 C14orf119Q9NWQ9 140 aa7.02□□□□□ -1.29
PRKDC-205ENST00000535375 AURKAIP1Q9NWT8 199 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-205ENST00000535375 MATN3O15232 486 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 IPO13O94829 963 aaKnown RBP7.01□□□□□ -1.29
PRKDC-205ENST00000535375 CASRP41180 1078 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 WNT3AP56704 352 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 MRPS9P82933 396 aaKnown RBP7.01□□□□□ -1.29
PRKDC-205ENST00000535375 CMIPQ8IY22 773 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 MSL3Q8N5Y2 521 aaKnown RBP7.01□□□□□ -1.29
PRKDC-205ENST00000535375 COG1Q8WTW3 980 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 LMBR1Q8WVP7 490 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 AUTS2Q8WXX7 1259 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 EXTL1Q92935 676 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 WASHC2AQ641Q2 1341 aa7.01□□□□□ -1.29
PRKDC-205ENST00000535375 PRKD3O94806 890 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 AMHP03971 560 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 GYPEP15421 78 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 CNGB1Q14028 1251 aaPredicted RBP7□□□□□ -1.29
PRKDC-205ENST00000535375 SPTY2D1Q68D10 685 aaPredicted RBP7□□□□□ -1.29
PRKDC-205ENST00000535375 FAM180AQ6UWF9 173 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 RNF207Q6ZRF8 634 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 ZNF662Q6ZS27 426 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 DDX42Q86XP3 938 aaKnown RBP eCLIP7□□□□□ -1.29
PRKDC-205ENST00000535375 ELOA2Q8IYF1 753 aaPredicted RBP7□□□□□ -1.29
PRKDC-205ENST00000535375 ZNF341Q9BYN7 854 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 CSRNP2Q9H175 543 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 SLC5A4Q9NY91 659 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 ZBTB21Q9ULJ3 1066 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 HDAC5Q9UQL6 1122 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 ATP8A1Q9Y2Q0 1164 aa7□□□□□ -1.29
PRKDC-205ENST00000535375 HOXA3O43365 443 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-205ENST00000535375 TNFRSF1AP19438 455 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 C19orf54Q5BKX5 351 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 TOR2AQ5JU69 321 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 SNX33Q8WV41 574 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
PRKDC-205ENST00000535375 ST8SIA2Q92186 375 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 IL17RAQ96F46 866 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 FAM126AQ9BYI3 521 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-205ENST00000535375 VPS11Q9H270 941 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 DNAJC28Q9NX36 388 aa6.99□□□□□ -1.29
PRKDC-205ENST00000535375 HECAQ9UBI9 543 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-205ENST00000535375 POU3F3P20264 500 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-205ENST00000535375 MAN2A2P49641 1150 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 GZMKP49863 264 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 CCT2P78371 535 aaKnown RBP6.98□□□□□ -1.29
PRKDC-205ENST00000535375 ABHD15Q6UXT9 468 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 AMOTL1Q8IY63 956 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 MB21D1Q8N884 522 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 GLB1L3Q8NCI6 653 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-205ENST00000535375 FATE1Q969F0 183 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 PLEKHG4BQ96PX9 1271 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 CDC5LQ99459 802 aaKnown RBP6.98□□□□□ -1.29
PRKDC-205ENST00000535375 CPPED1Q9BRF8 314 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-205ENST00000535375 GPR87Q9BY21 358 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 IFT122Q9HBG6 1241 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 RPTORQ8N122 1335 aa6.98□□□□□ -1.29
PRKDC-205ENST00000535375 PHLDB1Q86UU1 1377 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms