RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RBL2Q08999 1139 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 HAUS6Q7Z4H7 955 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ZNF507Q8TCN5 953 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 HVCN1Q96D96 273 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 C2orf40Q9H1Z8 148 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ADAMTS10Q9H324 1103 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 PHLPP2Q6ZVD8 1323 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 SLC16A4O15374 487 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
SCARB1-204ENST00000535005 GPR32O75388 356 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 VTNP04004 478 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 EFNA5P52803 228 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 ISM2Q6H9L7 571 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 STXBP4Q6ZWJ1 553 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 GUF1Q8N442 669 aaKnown RBP13.49□□□□□ -0.25
SCARB1-204ENST00000535005 RNF149Q8NC42 400 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 DEPTORQ8TB45 409 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 DHX38Q92620 1227 aaKnown RBP13.49□□□□□ -0.25
SCARB1-204ENST00000535005 WNT8BQ93098 351 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 TMEM134Q9H6X4 195 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 BRCA2P51587 3418 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 UBE4BO95155 1302 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 ADGRA3Q8IWK6 1321 aa13.49□□□□□ -0.25
SCARB1-204ENST00000535005 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 CASP5P51878 434 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 MRPS6P82932 125 aaKnown RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 FILIP1Q7Z7B0 1213 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ADSSL1Q8N142 457 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 SCFD1Q8WVM8 642 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 MYH11P35749 1972 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 A0A087WZ62 844 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 K7ENM7 598 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 GCNT3O95395 438 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 MYBP10242 640 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 PRCPP42785 496 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 PHKA2P46019 1235 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 CRYBB1P53674 252 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 TLE2Q04725 743 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 MGAT3Q09327 533 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ZBTB8OSQ8IWT0 167 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 NLRP4Q96MN2 994 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 CELF4Q9BZC1 486 aaKnown RBP13.48□□□□□ -0.25
SCARB1-204ENST00000535005 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 DACH1Q9UI36 760 aa13.48□□□□□ -0.25
SCARB1-204ENST00000535005 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 DENND3A2RUS2 1198 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 TPM4P67936 248 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 STIM1Q13586 685 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 KIZQ2M2Z5 673 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 SMYD4Q8IYR2 804 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 DHTKD1Q96HY7 919 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 KIFC3Q9BVG8 833 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 GCOM2Q9BZD3 368 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 INO80BQ9C086 356 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-204ENST00000535005 FZD8Q9H461 694 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 TBX20Q9UMR3 447 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
SCARB1-204ENST00000535005 K7ERI5 159 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
SCARB1-204ENST00000535005 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
SCARB1-204ENST00000535005 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
SCARB1-204ENST00000535005 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
SCARB1-204ENST00000535005 HOXD13P35453 343 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 THPOP40225 353 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 BFSP2Q13515 415 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 PCBP1Q15365 356 aaKnown RBP eCLIP13.46□□□□□ -0.252e-8■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms