RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MEIS1O00470 390 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
CAPN1-214ENST00000528165 GH1P01241 217 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 NEFHP12036 1026 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 CCDC15Q0P6D6 951 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 RRP1BQ14684 758 aaKnown RBP15.75■□□□□ 0.11
CAPN1-214ENST00000528165 INTS8Q75QN2 995 aaKnown RBP15.75■□□□□ 0.11
CAPN1-214ENST00000528165 ZDHHC14Q8IZN3 488 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 PCK1P35558 622 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-214ENST00000528165 PSMC6P62333 389 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 THEMIS2Q5TEJ8 643 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 ARHGEF18Q6ZSZ5 1173 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 CATSPER3Q86XQ3 398 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 LMNTD2Q8IXW0 634 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 RNPEPL1Q9HAU8 725 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 NKIRAS1Q9NYS0 192 aa15.75■□□□□ 0.11
CAPN1-214ENST00000528165 LOC102724428A0A0B4J2F2 783 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 TBCAO75347 108 aaKnown RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ECEL1O95672 775 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 PSMC2P35998 433 aaKnown RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 FMO5P49326 533 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 HADHBP55084 474 aaKnown RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 SIK1P57059 783 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 MGAT5Q09328 741 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 SETDB1Q15047 1291 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 CLEC4GQ6UXB4 293 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ECHDC2Q86YB7 292 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 SYT2Q8N9I0 419 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ERMNQ8TAM6 284 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 GRAMD1AQ96CP6 724 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 MAGEB18Q96M61 343 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 CTNNAL1Q9UBT7 734 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 NKX1-2Q9UD57 310 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 KLHL33A6NCF5 533 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 PPP1R11O60927 126 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 SNUPNO95149 360 aaKnown RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 FESP07332 822 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 GNAZP19086 355 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 CALB2P22676 271 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 BTDP43251 543 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 KCNJ1P48048 391 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ITPK1Q13572 414 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
CAPN1-214ENST00000528165 MTFR1Q15390 333 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 GRIK5Q16478 980 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 ARHGAP44Q17R89 818 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 VSIG1Q86XK7 387 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 SLFN12Q8IYM2 578 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 LRRC42Q9Y546 428 aa15.74■□□□□ 0.11
CAPN1-214ENST00000528165 FOXO6A8MYZ6 492 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RSPH10B2B2RC85 870 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 E7ENQ6 273 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 AHCYL1O43865 530 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 ATP5HO75947 161 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RSPH10BP0C881 870 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RAD23BP54727 409 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RWDD2BP57060 319 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 KCNA1Q09470 495 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 MPP2Q14168 576 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 MESDQ14696 234 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 PARP6Q2NL67 630 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 CGB2Q6NT52 195 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RNF217Q8TC41 542 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 PIGOQ8TEQ8 1089 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 UTP4Q969X6 686 aaKnown RBP15.73■□□□□ 0.11
CAPN1-214ENST00000528165 BORCS6Q96GS4 357 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 GPR88Q9GZN0 384 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 CPSF2Q9P2I0 782 aaKnown RBP15.73■□□□□ 0.11
CAPN1-214ENST00000528165 TCRBV7S2A1N4TA0A589 114 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 LRRD1A4D1F6 860 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 COMTP21964 271 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 NOVP48745 357 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
CAPN1-214ENST00000528165 STRN3Q13033 797 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 SLC30A9Q6PML9 568 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 TSC22D3Q99576 134 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 PITPNM3Q9BZ71 974 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
CAPN1-214ENST00000528165 DPPA5A6NC42 116 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 FTLP02792 175 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 PYGMP11217 842 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 PECAM1P16284 738 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MRPS35P82673 323 aaKnown RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 ZNF568Q3ZCX4 644 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 MIGA2Q7L4E1 593 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 SLC13A5Q86YT5 568 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 AGGF1Q8N302 714 aaeCLIP15.72■□□□□ 0.11
CAPN1-214ENST00000528165 STK32AQ8WU08 396 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 AGPAT1Q99943 283 aa15.72■□□□□ 0.11
CAPN1-214ENST00000528165 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms