RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DENND3A2RUS2 1198 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ANKRD63C9JTQ0 380 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 K7ERI5 159 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 KRT18P05783 430 aaKnown RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 MYL1P05976 194 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 PFKMP08237 780 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 MYBP10242 640 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 IDEP14735 1019 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 GAP43P17677 238 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 PROZP22891 400 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ASIC1P78348 528 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 KIAA0895Q8NCT3 520 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 SEPT8Q92599 483 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 CPB2Q96IY4 423 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 IFT74Q96LB3 600 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ACO2Q99798 780 aaKnown RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 LBHD1Q9BQE6 289 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-205ENST00000527046 RGS18Q9NS28 235 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 RNF19AQ9NV58 838 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 TBX20Q9UMR3 447 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 CEP290O15078 2479 aa11.87□□□□□ -0.51
NEDD8-205ENST00000527046 ABHD14A-ACY1A0A1B0GW23 586 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 TISP43B9A030 160 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 INO80B-WBP1J3KQ70 363 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 PIGRP01833 764 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 PRKCBP05771 671 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 EFNA5P52803 228 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 DEFB103AP81534 67 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 PAK2Q13177 524 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 KCNB1Q14721 858 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CAMK4Q16566 473 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 ZNF598Q86UK7 904 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 SMG8Q8ND04 991 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 APBB2Q92870 758 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 ADAM2Q99965 735 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 EIF2AQ9BY44 585 aaKnown RBP11.86□□□□□ -0.51
NEDD8-205ENST00000527046 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CHST12Q9NRB3 414 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 CNTNAP2Q9UHC6 1331 aa11.86□□□□□ -0.51
NEDD8-205ENST00000527046 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 TGFB1I1O43294 461 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 FAM189A1O60320 539 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 ZNF623O75123 536 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 ADSSP30520 456 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 IKBKEQ14164 716 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 MAPK6Q16659 721 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 MRPL10Q7Z7H8 261 aaKnown RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 ZBTB8OSQ8IWT0 167 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 TOP1MTQ969P6 601 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 PDZD7Q9H5P4 517 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 SLC39A2Q9NP94 309 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 PRMT7Q9NVM4 692 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 MAN1B1Q9UKM7 699 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-205ENST00000527046 TNFSF13BQ9Y275 285 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
NEDD8-205ENST00000527046 ZMYM2Q9UBW7 1377 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 K7ENM7 598 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 KINO60870 393 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms