RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 WFS1O76024 890 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 EYA4O95677 639 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 COILP38432 576 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 CCNG1P51959 295 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 ARHGAP4P98171 946 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 SF3A3Q12874 501 aaKnown RBP eCLIP11.04□□□□□ -0.649e-22■■■■■ 40.8
SPIDR-225ENST00000524141 GRAPQ13588 217 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 TTC27Q6P3X3 843 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 AGPAT1Q99943 283 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 BHMT2Q9H2M3 363 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 RABGAP1Q9Y3P9 1069 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 RSPH10B2B2RC85 870 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 DIAPH2O60879 1101 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 RSPH10BP0C881 870 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 GPC5P78333 572 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 MYL7Q01449 175 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 PRR16Q569H4 304 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 UHMK1Q8TAS1 419 aaKnown RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 SPDL1Q96EA4 605 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 SLC5A4Q9NY91 659 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 TAS2R14Q9NYV8 317 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 KLHL14Q9P2G3 628 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ZMYM2Q9UBW7 1377 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 FAM13AO94988 1023 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ECEL1O95672 775 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 KRT16P08779 473 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CCNB1P14635 433 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 SLC16A2P36021 539 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ARMC2Q8NEN0 867 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 FBF1Q8TES7 1133 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 CRYGNQ8WXF5 182 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 KRT35Q92764 455 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 PLVAPQ9BX97 442 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 WHRNQ9P202 907 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 SEL1LQ9UBV2 794 aa11.03□□□□□ -0.64
SPIDR-225ENST00000524141 MTA2O94776 668 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 GCKP35557 465 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 PDE6BP35913 854 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 PEX5P50542 639 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 ICA1Q05084 483 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 KCNA1Q09470 495 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 LONRF1Q17RB8 773 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 RNF43Q68DV7 783 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 ARHGEF18Q6ZSZ5 1173 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 SLC13A5Q86YT5 568 aaPredicted RBP11.02□□□□□ -0.64
SPIDR-225ENST00000524141 KIRREL3Q8IZU9 778 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 MGARPQ8TDB4 240 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 RUSC1Q9BVN2 902 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.64
SPIDR-225ENST00000524141 CD209Q9NNX6 404 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 PRKAG3Q9UGI9 489 aa11.02□□□□□ -0.64
SPIDR-225ENST00000524141 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.64
SPIDR-225ENST00000524141 ATP5HO75947 161 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 FTLP02792 175 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-225ENST00000524141 IL1R1P14778 569 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 GRIK3Q13003 919 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 ACVR2BQ13705 512 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
SPIDR-225ENST00000524141 LRRC14Q15048 493 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 QRICH1Q2TAL8 776 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 CBWD6Q4V339 395 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 CBWD3Q5JTY5 395 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 CBWD5Q5RIA9 395 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 MFSD14BQ5SR56 506 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
SPIDR-225ENST00000524141 AADACL2Q6P093 401 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 VSTM1Q6UX27 236 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 KCTD1Q719H9 257 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 TXLNGQ9NUQ3 528 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 SERPINB13Q9UIV8 391 aa11.02□□□□□ -0.65
SPIDR-225ENST00000524141 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms