RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
TRAM1-203ENST00000520700 GTPBP4Q9BZE4 634 aaKnown RBP19.17■□□□□ 0.66
TRAM1-203ENST00000520700 TMX1Q9H3N1 280 aa19.17■□□□□ 0.66
TRAM1-203ENST00000520700 AGPAT5Q9NUQ2 364 aa19.17■□□□□ 0.66
TRAM1-203ENST00000520700 PCDHB13Q9Y5F0 798 aa19.17■□□□□ 0.66
TRAM1-203ENST00000520700 TET1Q8NFU7 2136 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 A0A1B0GUA9 196 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 DENND3A2RUS2 1198 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 TSPAN1O60635 241 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 SMC2O95347 1197 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 PRKCBP05771 671 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 NMT1P30419 496 aaKnown RBP19.16■□□□□ 0.66
TRAM1-203ENST00000520700 PNOCQ13519 176 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 TCTN1Q2MV58 587 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 KMT5BQ4FZB7 885 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 FAM26FQ5R3K3 315 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 RASIP1Q5U651 963 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 ZNF365Q70YC5 407 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.16■□□□□ 0.664e-7■■□□□ 12
TRAM1-203ENST00000520700 TSPYL2Q9H2G4 693 aaPredicted RBP19.16■□□□□ 0.66
TRAM1-203ENST00000520700 CLSTN2Q9H4D0 955 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 MRPL44Q9H9J2 332 aaKnown RBP19.16■□□□□ 0.66
TRAM1-203ENST00000520700 RGS18Q9NS28 235 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 TBX20Q9UMR3 447 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 PCDHA5Q9Y5H7 936 aa19.16■□□□□ 0.66
TRAM1-203ENST00000520700 SCN5AQ14524 2016 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 K7ENM7 598 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ENPP3O14638 875 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 EIF3DO15371 548 aaKnown RBP eCLIP19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ERLIN2O94905 339 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 PIGRP01833 764 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ACRP10323 421 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 FGFR4P22455 802 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 FAM189BP81408 668 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ZPBP2Q6X784 338 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 EPM2AIP1Q7L775 607 aaPredicted RBP19.15■□□□□ 0.66
TRAM1-203ENST00000520700 RTN4RL1Q86UN2 441 aaPredicted RBP19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ZNF507Q8TCN5 953 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 C1orf112Q9NSG2 853 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 EXOC1Q9NV70 894 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 RMND1Q9NWS8 449 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 CNTNAP2Q9UHC6 1331 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 MYH11P35749 1972 aa19.15■□□□□ 0.66
TRAM1-203ENST00000520700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-203ENST00000520700 ZSCAN20P17040 1043 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-203ENST00000520700 ARF4P18085 180 aaPredicted RBP19.14■□□□□ 0.65
TRAM1-203ENST00000520700 STRN3Q13033 797 aa19.14■□□□□ 0.65
TRAM1-203ENST00000520700 PRPF4BQ13523 1007 aaKnown RBP19.14■□□□□ 0.65
TRAM1-203ENST00000520700 MAP4K3Q8IVH8 894 aa19.14■□□□□ 0.65
TRAM1-203ENST00000520700 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
TRAM1-203ENST00000520700 MRPL4Q9BYD3 311 aaKnown RBP19.14■□□□□ 0.65
TRAM1-203ENST00000520700 TNFSF13BQ9Y275 285 aa19.14■□□□□ 0.65
TRAM1-203ENST00000520700 MGEA5O60502 916 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 ZNF623O75123 536 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 BMT2Q1RMZ1 405 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 L1TD1Q5T7N2 865 aaKnown RBP19.13■□□□□ 0.65
TRAM1-203ENST00000520700 NOTUMQ6P988 496 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 SLC24A5Q71RS6 500 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 ACO2Q99798 780 aaKnown RBP19.13■□□□□ 0.65
TRAM1-203ENST00000520700 ADAM2Q99965 735 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 UBE2OQ9C0C9 1292 aaKnown RBP19.13■□□□□ 0.65
TRAM1-203ENST00000520700 MTIF3Q9H2K0 278 aaKnown RBP19.13■□□□□ 0.65
TRAM1-203ENST00000520700 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 PTPRHQ9HD43 1115 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
TRAM1-203ENST00000520700 KIAA1468Q9P260 1216 aa19.13■□□□□ 0.65
TRAM1-203ENST00000520700 UBE4BO95155 1302 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 A0A0U1RQF3 1178 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.12■□□□□ 0.65
TRAM1-203ENST00000520700 C9IYK1 514 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 B4GALT5O43286 388 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 GCNT3O95395 438 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 SKIP12755 728 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 PROZP22891 400 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 CASP5P51878 434 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 STK4Q13043 487 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
TRAM1-203ENST00000520700 COBLL1Q53SF7 1204 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 CRIPAKQ8N1N5 446 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 PHOSPHO2Q8TCD6 241 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 LINC01599Q8WXQ3 324 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 ACCSQ96QU6 501 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 ELAC1Q9H777 363 aaKnown RBP19.12■□□□□ 0.65
TRAM1-203ENST00000520700 TBC1D7Q9P0N9 293 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 PCDH10Q9P2E7 1040 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 EXOC7Q9UPT5 735 aa19.12■□□□□ 0.65
TRAM1-203ENST00000520700 PIN4Q9Y237 131 aaKnown RBP19.12■□□□□ 0.65
TRAM1-203ENST00000520700 TTLL13PA6NNM8 815 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 N4BP3O15049 544 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 TOM1L1O75674 476 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 EDN1P05305 212 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 MYBP10242 640 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 RAB27AP51159 221 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 SNRPFP62306 86 aaKnown RBP19.11■□□□□ 0.65
TRAM1-203ENST00000520700 UBXN11Q5T124 520 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 ATF7IP2Q5U623 682 aa19.11■□□□□ 0.65
TRAM1-203ENST00000520700 SLC27A1Q6PCB7 646 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms