RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 UIMC1Q96RL1 719 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 TCF25Q9BQ70 676 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 HAPLN2Q9GZV7 340 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 ZMAT4Q9H898 229 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 AGO3Q9H9G7 860 aaKnown RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 IL23AQ9NPF7 189 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 H2AFY2Q9P0M6 372 aaPredicted RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 CHPF2Q9P2E5 772 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 APOBEC2Q9Y235 224 aaKnown RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 A0A0A6YYJ9 748 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 OPHN1O60890 802 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 TOX4O94842 621 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 ATXN1P54253 815 aaKnown RBP5.44□□□□□ -1.54
SQLE-204ENST00000520493 NANOS3P60323 173 aaKnown RBP5.44□□□□□ -1.54
SQLE-204ENST00000520493 IL2P60568 153 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 ABHD18Q0P651 414 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 STRN3Q13033 797 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 SAFB2Q14151 953 aaKnown RBP eCLIP5.44□□□□□ -1.54
SQLE-204ENST00000520493 GPR158Q5T848 1215 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 FAM111BQ6SJ93 734 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 GSPT2Q8IYD1 628 aaKnown RBP5.44□□□□□ -1.54
SQLE-204ENST00000520493 JDP2Q8WYK2 163 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 MIEF2Q96C03 454 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 ZNF503Q96F45 646 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 PLEKHG4BQ96PX9 1271 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 POLR3GLQ9BT43 218 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 SLC5A4Q9NY91 659 aa5.44□□□□□ -1.54
SQLE-204ENST00000520493 UBE2QL1A1L167 161 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 NPIPB8E9PQR5 432 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 K7ESF4 209 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 NRP1O14786 923 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 ALDH1L1O75891 902 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 ZNF202O95125 648 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.54
SQLE-204ENST00000520493 XPAP23025 273 aaPredicted RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 LSP1P33241 339 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 MCM7P33993 719 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 NPEPPSP55786 919 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 EVA1CP58658 441 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 SMAD3P84022 425 aaKnown RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 CNGB1Q14028 1251 aaPredicted RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 STAT4Q14765 748 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 ELAVL1Q15717 326 aaKnown RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 SEPT7Q16181 437 aaKnown RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 CDYL2Q8N8U2 506 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 GPR101Q96P66 508 aaPredicted RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 GPHA2Q96T91 129 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 PARPBPQ9NWS1 579 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 NCDNQ9UBB6 729 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 TCEAL9Q9UHQ7 104 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 KCNG1Q9UIX4 513 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 SH3BP1Q9Y3L3 701 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 PCDHB6Q9Y5E3 794 aa5.43□□□□□ -1.54
SQLE-204ENST00000520493 WDR33Q9C0J8 1336 aaKnown RBP5.43□□□□□ -1.54
SQLE-204ENST00000520493 E2F8A0AVK6 867 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 NRP2O60462 931 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 IPO13O94829 963 aaKnown RBP5.42□□□□□ -1.54
SQLE-204ENST00000520493 PCDH8O95206 1070 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 KIR2DL3P43628 341 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 LSSP48449 732 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 PHC1P78364 1004 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 ACAP1Q15027 740 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 FKBP15Q5T1M5 1219 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 CAMKK2Q96RR4 588 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
SQLE-204ENST00000520493 ARID4BQ4LE39 1312 aaPredicted RBP5.42□□□□□ -1.54
SQLE-204ENST00000520493 MYPNQ86TC9 1320 aa5.42□□□□□ -1.54
SQLE-204ENST00000520493 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 MTSS1O43312 755 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 MFAP3LO75121 409 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 ULK1O75385 1050 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 MAN2A2P49641 1150 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 NRG3P56975 720 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 TUBA3CQ13748 450 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 TUBA3EQ6PEY2 450 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 UNQ6494/PRO21346Q6UXR6 183 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 CMTM4Q8IZR5 234 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 ASPSCR1Q9BZE9 553 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 ZNF703Q9H7S9 590 aaPredicted RBP5.41□□□□□ -1.54
SQLE-204ENST00000520493 THRAP3Q9Y2W1 955 aaKnown RBP5.41□□□□□ -1.54
SQLE-204ENST00000520493 EID1Q9Y6B2 187 aa5.41□□□□□ -1.54
SQLE-204ENST00000520493 FKBP9O95302 570 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 C1SP09871 688 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 GNAT2P19087 354 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 ADAM8P78325 824 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 RRP1BQ14684 758 aaKnown RBP5.4□□□□□ -1.54
SQLE-204ENST00000520493 TTF1Q15361 905 aaPredicted RBP5.4□□□□□ -1.54
SQLE-204ENST00000520493 NFE2Q16621 373 aaPredicted RBP5.4□□□□□ -1.54
SQLE-204ENST00000520493 CCDC178Q5BJE1 867 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 SPTY2D1Q68D10 685 aaPredicted RBP5.4□□□□□ -1.54
SQLE-204ENST00000520493 FRMD7Q6ZUT3 714 aa5.4□□□□□ -1.54
SQLE-204ENST00000520493 FKBP9P1Q75LS8 142 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms