RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	NAMPT	P43490	491 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	LRRC55	Q6ZSA7	311 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	DEPTOR	Q8TB45	409 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	MRPS27	Q92552	414 aa	Known RBP	26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	AK8	Q96MA6	479 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	CSRNP2	Q9H175	543 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	RSAD1	Q9HA92	442 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	GPRC5C	Q9NQ84	441 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	CLDND1	Q9NY35	253 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885	STK39	Q9UEW8	545 aa		26.76	■■□□□ 1.87
CNOT7-204	ENST00000518885		K7ELQ4	463 aa	Predicted RBP	26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	SLC26A4	O43511	780 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	CSPG5	O95196	566 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	EYA4	O95677	639 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	ITGA4	P13612	1032 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	NCL	P19338	710 aa	Known RBP	26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	KCNQ1	P51787	676 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	COL19A1	Q14993	1142 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	CDCA2	Q69YH5	1023 aa	Predicted RBP	26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	LPP	Q93052	612 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	NGRN	Q9NPE2	291 aa	Known RBP	26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	INPP5F	Q9Y2H2	1132 aa		26.75	■■□□□ 1.87
CNOT7-204	ENST00000518885	PHLPP2	Q6ZVD8	1323 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	VWA3A	A6NCI4	1184 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	DNAJB1	P25685	340 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	EFNA5	P52803	228 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	CAMK1	Q14012	370 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	MAPK6	Q16659	721 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	TMEM132A	Q24JP5	1023 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	SLC27A1	Q6PCB7	646 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	PPP4R3CP	Q6ZMV5	832 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	TMEM169	Q96HH4	297 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	FAM193B	Q96PV7	902 aa	Predicted RBP	26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	CDCA3	Q99618	268 aa	Predicted RBP	26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	TIPIN	Q9BVW5	301 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	KCNG1	Q9UIX4	513 aa		26.74	■■□□□ 1.87
CNOT7-204	ENST00000518885	TNFRSF10A	O00220	468 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	ZC3H11A	O75152	810 aa	Known RBP eCLIP	26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	OFD1	O75665	1012 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	SRGAP2B	P0DMP2	458 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	BCAR1	P56945	870 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	HYAL1	Q12794	435 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	ECM1	Q16610	540 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	LONRF3	Q496Y0	759 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	UBXN11	Q5T124	520 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	DRC1	Q96MC2	740 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	IGFLR1	Q9H665	355 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	ENTPD7	Q9NQZ7	604 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	TBC1D13	Q9NVG8	400 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	HCST	Q9UBK5	93 aa		26.73	■■□□□ 1.87
CNOT7-204	ENST00000518885	ARF4	P18085	180 aa	Predicted RBP	26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	ZRSR1	Q15695	479 aa	Known RBP	26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	IL17A	Q16552	155 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	AMHR2	Q16671	573 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	FAM187B	Q17R55	369 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	SLC39A11	Q8N1S5	342 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	CPB2	Q96IY4	423 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	TLE6	Q9H808	572 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	IPP	Q9Y573	584 aa		26.72	■■□□□ 1.87
CNOT7-204	ENST00000518885	PP2D1	A8MPX8	630 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	CTC1	Q2NKJ3	1217 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	AGMO	Q6ZNB7	445 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	EFHB	Q8N7U6	833 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	TCF25	Q9BQ70	676 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	ADPGK	Q9BRR6	497 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	FZD8	Q9H461	694 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885	C17orf75	Q9HAS0	396 aa		26.71	■■□□□ 1.87
CNOT7-204	ENST00000518885		A0A1B0GUA9	196 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	N4BP3	O15049	544 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	NR1I2	O75469	434 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	IRS1	P35568	1242 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	UBA7	P41226	1012 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	NRIP1	P48552	1158 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	NDUFV1	P49821	464 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	PRPF4B	Q13523	1007 aa	Known RBP	26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	HYI	Q5T013	277 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	PTCRA	Q6ISU1	281 aa	Predicted RBP	26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	TMC7	Q7Z402	723 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	CALML4	Q96GE6	196 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	TMEM175	Q9BSA9	504 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	KCND2	Q9NZV8	630 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	GIT1	Q9Y2X7	761 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885	ZMYM2	Q9UBW7	1377 aa		26.7	■■□□□ 1.86
CNOT7-204	ENST00000518885		E9PMD0	336 aa		26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	PRKCB	P05771	671 aa		26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	CDC25A	P30304	524 aa		26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	LONP1	P36776	959 aa	Known RBP	26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	DMP1	Q13316	513 aa	Predicted RBP	26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	SMC1A	Q14683	1233 aa	Known RBP	26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	SMG8	Q8ND04	991 aa	Known RBP	26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	SNX21	Q969T3	373 aa		26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	EIF2A	Q9BY44	585 aa	Known RBP	26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885	GBP3	Q9H0R5	595 aa		26.69	■■□□□ 1.86
CNOT7-204	ENST00000518885		H3BQ06	376 aa	Predicted RBP	26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	ACKR2	O00590	384 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	FSCN2	O14926	492 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	PDIA4	P13667	645 aa	Known RBP	26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	SYT1	P21579	422 aa		26.68	■■□□□ 1.86
CNOT7-204	ENST00000518885	PBX3	P40426	434 aa		26.68	■■□□□ 1.86

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms