RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 GUCY1A3Q02108 690 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 TADA2BQ86TJ2 420 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 OGFOD1Q8N543 542 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 CCPG1Q9ULG6 757 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 ALG6Q9Y672 507 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 MYO1FO00160 1098 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 RDH13Q8NBN7 331 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 C3orf20Q8ND61 904 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 ALG3Q92685 438 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 AGBL1Q96MI9 1066 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 CBWD1Q9BRT8 395 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 ERP44Q9BS26 406 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 CELF4Q9BZC1 486 aaKnown RBP18.92■□□□□ 0.62
SNX2-213ENST00000514949 TBC1D22BQ9NU19 505 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 HSPBP1Q9NZL4 362 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 SLC12A6Q9UHW9 1150 aa18.92■□□□□ 0.62
SNX2-213ENST00000514949 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 RTN2O75298 545 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 LRRN2O75325 713 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 FTLP02792 175 aaPredicted RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 GPC5P78333 572 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 ARHGEF19Q8IW93 802 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 C4orf19Q8IY42 314 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 FAM71AQ8IYT1 594 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 PRPF38AQ8NAV1 312 aaKnown RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 PSMD1Q99460 953 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 GLIS2Q9BZE0 524 aaPredicted RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 ZDHHC18Q9NUE0 388 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 INPP5BP32019 993 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 NCKAP1LP55160 1127 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 EIF3BP55884 814 aaKnown RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 MRPS9P82933 396 aaKnown RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 DR1Q01658 176 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 HAUS6Q7Z4H7 955 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 YTHDF3Q7Z739 585 aaKnown RBP18.91■□□□□ 0.62
SNX2-213ENST00000514949 IL31RAQ8NI17 732 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 SLC20A1Q8WUM9 679 aa18.91■□□□□ 0.62
SNX2-213ENST00000514949 GGPS1O95749 300 aa18.9■□□□□ 0.62
SNX2-213ENST00000514949 DHX9Q08211 1270 aaKnown RBP18.9■□□□□ 0.62
SNX2-213ENST00000514949 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
SNX2-213ENST00000514949 NAA35Q5VZE5 725 aa18.9■□□□□ 0.62
SNX2-213ENST00000514949 PROCA1Q8NCQ7 364 aaPredicted RBP18.9■□□□□ 0.62
SNX2-213ENST00000514949 PLEKHO2Q8TD55 490 aa18.9■□□□□ 0.62
SNX2-213ENST00000514949 TMEM39BQ9GZU3 492 aa18.9■□□□□ 0.62
SNX2-213ENST00000514949 PCIF1Q9H4Z3 704 aa18.9■□□□□ 0.62
SNX2-213ENST00000514949 NOCTQ9UK39 431 aaKnown RBP18.9■□□□□ 0.62
SNX2-213ENST00000514949 DDX39AO00148 427 aaKnown RBP18.89■□□□□ 0.62
SNX2-213ENST00000514949 NFIBO00712 420 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 FAM107AO95990 144 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 PAEPP09466 180 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 GCLMP48507 274 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 PEX5P50542 639 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 RTKN2Q8IZC4 609 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 UBL4BQ8N7F7 174 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 LPAR1Q92633 364 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 ZBED3Q96IU2 234 aaPredicted RBP18.89■□□□□ 0.62
SNX2-213ENST00000514949 FMO2Q99518 471 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 TMEM117Q9H0C3 514 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.62
SNX2-213ENST00000514949 PCYOX1Q9UHG3 505 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 COQ4Q9Y3A0 265 aa18.89■□□□□ 0.62
SNX2-213ENST00000514949 RGPD3A6NKT7 1758 aaPredicted RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 RGPD4Q7Z3J3 1758 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 TISP43B9A030 160 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 WDR46O15213 610 aaKnown RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 C21orf2O43822 256 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 CHRNB2P17787 502 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 YWHABP31946 246 aaKnown RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 CHRNA3P32297 505 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 GBP1P32455 592 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 SPP2Q13103 211 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 NLRP14Q86W24 1093 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 CDAN1Q8IWY9 1227 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 RPUSD2Q8IZ73 545 aaKnown RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 OR2W6PQ8NHA6 318 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 EPS8L1Q8TE68 723 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 UBLCP1Q8WVY7 318 aaPredicted RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 CD101Q93033 1021 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 HVCN1Q96D96 273 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 CCT8L2Q96SF2 557 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 ERVK-5Q9HDB9 667 aa18.89■□□□□ 0.61
SNX2-213ENST00000514949 SEPT11Q9NVA2 429 aaKnown RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 ASTN2O75129 1339 aaPredicted RBP18.89■□□□□ 0.61
SNX2-213ENST00000514949 PHF2O75151 1096 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 NUDT17P0C025 328 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 CTNNA2P26232 953 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 MXI1P50539 228 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 MTMR1Q13613 665 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 SKIDA1Q1XH10 827 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 MIGA2Q7L4E1 593 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 MYCBPAPQ8TBZ2 947 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 SYTL5Q8TDW5 730 aaPredicted RBP18.88■□□□□ 0.61
SNX2-213ENST00000514949 ZNF473Q8WTR7 871 aaKnown RBP18.88■□□□□ 0.61
SNX2-213ENST00000514949 SHC3Q92529 594 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 TRIM51Q9BSJ1 452 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
SNX2-213ENST00000514949 ANKEF1Q9NU02 776 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms