RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 TMC2Q8TDI7 906 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 ASAP3Q8TDY4 903 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 PRPF31Q8WWY3 499 aaKnown RBP9.92□□□□□ -0.82
NR1I3-232ENST00000512372 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 TMEM143Q96AN5 459 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 SEZ6LQ9BYH1 1024 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 VPS16Q9H269 839 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 PLCB1Q9NQ66 1216 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 KCND1Q9NSA2 647 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-232ENST00000512372 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 MYH11P35749 1972 aa9.92□□□□□ -0.82
NR1I3-232ENST00000512372 ESPNB1AK53 854 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TEX33O43247 280 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 EXOC3O60645 756 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MFAP3LO75121 409 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TOM1L1O75674 476 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 AFPP02771 609 aaKnown RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 ZNF286BP0CG31 522 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 KRT13P13646 458 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 KLRC1P26715 233 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MARK3P27448 753 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 LIG4P49917 911 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 PTENP60484 403 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 ADAM17P78536 824 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 BFSP1Q12934 665 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MFSD10Q14728 455 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MAPK6Q16659 721 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 EFCAB12Q6NXP0 572 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 SESTD1Q86VW0 696 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 NME8Q8N427 588 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 ZNF397Q8NF99 534 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 KAT2BQ92831 832 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 SLC35C1Q96A29 364 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 SH2D3AQ9BRG2 576 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 ARHGAP39Q9C0H5 1083 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 FZD8Q9H461 694 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 PRMT7Q9NVM4 692 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-232ENST00000512372 HSPBP1Q9NZL4 362 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 CAPN11Q9UMQ6 739 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 ZSWIM8A7E2V4 1837 aa9.91□□□□□ -0.82
NR1I3-232ENST00000512372 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 ACKR2O00590 384 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CCP110O43303 1012 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 EXTL3O43909 919 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 GYPCP04921 128 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 PTGS1P23219 599 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 HNRNPH3P31942 346 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 PSEN2P49810 448 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 ZBED6P86452 979 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CDK17Q00537 523 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 PTPN11Q06124 597 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CETN1Q12798 172 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 TC2NQ8N9U0 490 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 PCSK9Q8NBP7 692 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 TRPV1Q8NER1 839 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 DNAJC7Q99615 494 aa9.9□□□□□ -0.82
NR1I3-232ENST00000512372 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
NR1I3-232ENST00000512372 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 A0A0B4J269 797 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
NR1I3-232ENST00000512372 CLIC2O15247 247 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-232ENST00000512372 ADAMTS4O75173 837 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 PRKCBP05771 671 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
NR1I3-232ENST00000512372 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms