RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SRGAP2BP0DMP2 458 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 HOXA11P31270 313 aaPredicted RBP20.67■□□□□ 0.9
UBE3D-207ENST00000509102 IRS1P35568 1242 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 NRIP1P48552 1158 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 PPP2R5AQ15172 486 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 IGSF22Q8N9C0 903 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 TMEM169Q96HH4 297 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 FAM193BQ96PV7 902 aaPredicted RBP20.67■□□□□ 0.9
UBE3D-207ENST00000509102 CDCA3Q99618 268 aaPredicted RBP20.67■□□□□ 0.9
UBE3D-207ENST00000509102 C2orf40Q9H1Z8 148 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 RSAD1Q9HA92 442 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 NGRNQ9NPE2 291 aaKnown RBP20.67■□□□□ 0.9
UBE3D-207ENST00000509102 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.67■□□□□ 0.9
UBE3D-207ENST00000509102 ITGA4P13612 1032 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 CYP11B2P19099 503 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 PDCP20941 246 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 BCAR1P56945 870 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 MBTD1Q05BQ5 628 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 TMEM132AQ24JP5 1023 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 CTC1Q2NKJ3 1217 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 TMC7Q7Z402 723 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 MRPL10Q7Z7H8 261 aaKnown RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 RBM23Q86U06 439 aaKnown RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 IFT74Q96LB3 600 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 NECAB3Q96P71 396 aaPredicted RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 TCF25Q9BQ70 676 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 CSRNP2Q9H175 543 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 BHMT2Q9H2M3 363 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 GPRC5CQ9NQ84 441 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 DDX19AQ9NUU7 478 aaKnown RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 PRMT7Q9NVM4 692 aaPredicted RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 KIAA1024Q9UPX6 916 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 DNM3Q9UQ16 869 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 TCF20Q9UGU0 1960 aaKnown RBP20.66■□□□□ 0.9
UBE3D-207ENST00000509102 MYO7AQ13402 2215 aa20.66■□□□□ 0.9
UBE3D-207ENST00000509102 GRXCR2A6NFK2 248 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 OFD1O75665 1012 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 NCLP19338 710 aaKnown RBP20.65■□□□□ 0.9
UBE3D-207ENST00000509102 PBX3P40426 434 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 SLC39A11Q8N1S5 342 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 DEPTORQ8TB45 409 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 PRIMPOLQ96LW4 560 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 BACH2Q9BYV9 841 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 GBP3Q9H0R5 595 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 STK39Q9UEW8 545 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 NCOR1O75376 2440 aa20.65■□□□□ 0.9
UBE3D-207ENST00000509102 PLXNA4Q9HCM2 1894 aa20.64■□□□□ 0.9
UBE3D-207ENST00000509102 SPTBN5Q9NRC6 3674 aaKnown RBP20.64■□□□□ 0.9
UBE3D-207ENST00000509102 ADAM15Q13444 863 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 UBXN11Q5T124 520 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 PLPP4Q5VZY2 271 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 ADGRD2Q7Z7M1 963 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 TMEM87AQ8NBN3 555 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 KIFAP3Q92845 792 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 CPB2Q96IY4 423 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 IPPQ9Y573 584 aa20.64■□□□□ 0.89
UBE3D-207ENST00000509102 BMP15O95972 392 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 ARF4P18085 180 aaPredicted RBP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 CA8P35219 290 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 GTF2F1P35269 517 aaKnown RBP eCLIP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 NAMPTP43490 491 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 ERVFC1P60507 584 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 ATP2C1P98194 919 aaPredicted RBP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 SMC1AQ14683 1233 aaKnown RBP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 MAPK6Q16659 721 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 ARL6IP4Q66PJ3 421 aaKnown RBP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 SLC27A1Q6PCB7 646 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 AGMOQ6ZNB7 445 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 BRAPQ7Z569 592 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 CDK5RAP3Q96JB5 506 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
UBE3D-207ENST00000509102 CD207Q9UJ71 328 aa20.63■□□□□ 0.89
UBE3D-207ENST00000509102 MEIS3P2A8K0S8 358 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 FSCN2O14926 492 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 NR1I2O75469 434 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 IL9P15248 144 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 LTBRP36941 435 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 ZRSR1Q15695 479 aaKnown RBP20.62■□□□□ 0.89
UBE3D-207ENST00000509102 CLUL1Q15846 466 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 CDCA2Q69YH5 1023 aaPredicted RBP20.62■□□□□ 0.89
UBE3D-207ENST00000509102 KCTD17Q8N5Z5 321 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 EIF2AQ9BY44 585 aaKnown RBP20.62■□□□□ 0.89
UBE3D-207ENST00000509102 NT5C3AQ9H0P0 336 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 NRDE2Q9H7Z3 1164 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 PCDHGC5Q9Y5F6 944 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 BDP1A6H8Y1 2624 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 ATG2AQ2TAZ0 1938 aa20.62■□□□□ 0.89
UBE3D-207ENST00000509102 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
UBE3D-207ENST00000509102 VWA3AA6NCI4 1184 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 NT5C1B-RDH14C9J2C7 533 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 PER2O15055 1255 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 LINC01565O15544 149 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 TBX10O75333 385 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 EYA4O95677 639 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 ALDH2P05091 517 aa20.61■□□□□ 0.89
UBE3D-207ENST00000509102 SSTR3P32745 418 aaPredicted RBP20.61■□□□□ 0.89
UBE3D-207ENST00000509102 EFNA5P52803 228 aa20.61■□□□□ 0.89
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