RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 CPB2Q96IY4 423 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 PLIN2Q99541 437 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 RSAD1Q9HA92 442 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 N4BP3O15049 544 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 NR1I2O75469 434 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 CSPG5O95196 566 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 STK38Q15208 465 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 CLLU1OSQ5K130 101 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 HYIQ5T013 277 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 CDCA2Q69YH5 1023 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-211ENST00000507689 SLC27A1Q6PCB7 646 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 LPPQ93052 612 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
COL1A1-211ENST00000507689 C17orf75Q9HAS0 396 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 SPG21Q9NZD8 308 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
COL1A1-211ENST00000507689 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
COL1A1-211ENST00000507689 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-211ENST00000507689 NLRC5Q86WI3 1866 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 H0YCG3 227 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 K7ERI5 159 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 GRM6O15303 877 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 HIP1RO75146 1068 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 FGF18O76093 207 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 PRKCBP05771 671 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 ARF4P18085 180 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 BECN1Q14457 450 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 PDE12Q6L8Q7 609 aaKnown RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 SYT2Q8N9I0 419 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-211ENST00000507689 TMEM87AQ8NBN3 555 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 POF1BQ8WVV4 589 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 KMT5AQ9NQR1 393 aa17.25■□□□□ 0.35
COL1A1-211ENST00000507689 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 ZC3H11AO75152 810 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL1A1-211ENST00000507689 ITGB1P05556 798 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-211ENST00000507689 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 PEX3P56589 373 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 STRN3Q13033 797 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 FAM187BQ17R55 369 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 TJAP1Q5JTD0 557 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 MRPL10Q7Z7H8 261 aaKnown RBP17.24■□□□□ 0.35
COL1A1-211ENST00000507689 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
COL1A1-211ENST00000507689 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 TMEM169Q96HH4 297 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 APOL6Q9BWW8 343 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 CWH43Q9H720 699 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 TLR9Q9NR96 1032 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 IPPQ9Y573 584 aa17.24■□□□□ 0.35
COL1A1-211ENST00000507689 SRPRBQ9Y5M8 271 aaKnown RBP17.24■□□□□ 0.35
COL1A1-211ENST00000507689 A0A1B0GUA9 196 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 ACKR2O00590 384 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 OFD1O75665 1012 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 NPTXRO95502 500 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 LINC00271P0C7V0 271 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 CA8P35219 290 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
COL1A1-211ENST00000507689 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 TCEAL5Q5H9L2 206 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-211ENST00000507689 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-211ENST00000507689 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 ASB2Q96Q27 587 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 RPS6KC1Q96S38 1066 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 FZD8Q9H461 694 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 PRDM6Q9NQX0 595 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 ENTPD7Q9NQZ7 604 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 RNF19AQ9NV58 838 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
COL1A1-211ENST00000507689 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
COL1A1-211ENST00000507689 B4GALT5O43286 388 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
COL1A1-211ENST00000507689 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-211ENST00000507689 NPTX2P47972 431 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 BCAR1P56945 870 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 PLCB3Q01970 1234 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 RAD51AP2Q09MP3 1159 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 SLC39A14Q15043 492 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
COL1A1-211ENST00000507689 DCAF4L1Q3SXM0 396 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 UBXN11Q5T124 520 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 RRAGBQ5VZM2 374 aa17.22■□□□□ 0.35
COL1A1-211ENST00000507689 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms