RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 EFHBQ8N7U6 833 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 IGSF22Q8N9C0 903 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 MCPH1Q8NEM0 835 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 GPRC5CQ9NQ84 441 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 LRWD1Q9UFC0 647 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 LAD1O00515 517 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 CCT6AP40227 531 aaKnown RBP28.12■■■□□ 2.09
PVT1-201ENST00000504719 NRIP1P48552 1158 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 BCAR1P56945 870 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 KRT17Q04695 432 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 AMHR2Q16671 573 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 RBM23Q86U06 439 aaKnown RBP28.12■■■□□ 2.09
PVT1-201ENST00000504719 TBC1D13Q9NVG8 400 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 STK24Q9Y6E0 443 aa28.12■■■□□ 2.09
PVT1-201ENST00000504719 ARHGEF35A5YM69 484 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 TBX10O75333 385 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 HSP90AA1P07900 732 aaKnown RBP28.11■■■□□ 2.09
PVT1-201ENST00000504719 NOTUMQ6P988 496 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 PADI6Q6TGC4 694 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 FAM178BQ8IXR5 827 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 CCDC51Q96ER9 411 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 CPB2Q96IY4 423 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 RAB34Q9BZG1 259 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 NRDE2Q9H7Z3 1164 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 TLE6Q9H808 572 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 INPP5FQ9Y2H2 1132 aa28.11■■■□□ 2.09
PVT1-201ENST00000504719 NCLP19338 710 aaKnown RBP28.1■■■□□ 2.09
PVT1-201ENST00000504719 PRPHP41219 470 aa28.1■■■□□ 2.09
PVT1-201ENST00000504719 ALDH7A1P49419 539 aaKnown RBP28.1■■■□□ 2.09
PVT1-201ENST00000504719 NCBP1Q09161 790 aaKnown RBP28.1■■■□□ 2.09
PVT1-201ENST00000504719 IL17AQ16552 155 aa28.1■■■□□ 2.09
PVT1-201ENST00000504719 SMG8Q8ND04 991 aaKnown RBP28.1■■■□□ 2.09
PVT1-201ENST00000504719 CNNM3Q8NE01 707 aa28.1■■■□□ 2.09
PVT1-201ENST00000504719 RSAD1Q9HA92 442 aa28.1■■■□□ 2.09
PVT1-201ENST00000504719 CNTNAP2Q9UHC6 1331 aa28.1■■■□□ 2.09
PVT1-201ENST00000504719 NT5C1B-RDH14C9J2C7 533 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 CYP11B2P19099 503 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 NDUFV1P49821 464 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 PLPP4Q5VZY2 271 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 BRAPQ7Z569 592 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 CDCA3Q99618 268 aaPredicted RBP28.09■■■□□ 2.09
PVT1-201ENST00000504719 TCF25Q9BQ70 676 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 EIF2AQ9BY44 585 aaKnown RBP28.09■■■□□ 2.09
PVT1-201ENST00000504719 CSRNP2Q9H175 543 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 NGRNQ9NPE2 291 aaKnown RBP28.09■■■□□ 2.09
PVT1-201ENST00000504719 KIAA1024Q9UPX6 916 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 FAM50BQ9Y247 325 aa28.09■■■□□ 2.09
PVT1-201ENST00000504719 CARNS1A5YM72 827 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 LRRIQ4A6NIV6 560 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 PER2O15055 1255 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 ZC3H11AO75152 810 aaKnown RBP eCLIP28.08■■■□□ 2.09
PVT1-201ENST00000504719 ARF4P18085 180 aaPredicted RBP28.08■■■□□ 2.09
PVT1-201ENST00000504719 CLUL1Q15846 466 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 DUSP6Q16828 381 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 URGCPQ8TCY9 931 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 SNX29Q8TEQ0 813 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 MSLNLQ96KJ4 702 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 ENTPD7Q9NQZ7 604 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 CLEC1BQ9P126 229 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 CD207Q9UJ71 328 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 IPPQ9Y573 584 aa28.08■■■□□ 2.09
PVT1-201ENST00000504719 MBTPS2O43462 519 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 GLP2RO95838 553 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 GALTP07902 379 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 ITGA4P13612 1032 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 RNASELQ05823 741 aaKnown RBP28.07■■■□□ 2.08
PVT1-201ENST00000504719 CDCA2Q69YH5 1023 aaPredicted RBP28.07■■■□□ 2.08
PVT1-201ENST00000504719 DTHD1Q6ZMT9 781 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 CD320Q9NPF0 282 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 UBN1Q9NPG3 1134 aa28.07■■■□□ 2.08
PVT1-201ENST00000504719 DDX19AQ9NUU7 478 aaKnown RBP28.07■■■□□ 2.08
PVT1-201ENST00000504719 B4GALT5O43286 388 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 AFF1P51825 1210 aaKnown RBP28.06■■■□□ 2.08
PVT1-201ENST00000504719 ATP2C1P98194 919 aaPredicted RBP28.06■■■□□ 2.08
PVT1-201ENST00000504719 PPP4R3CPQ6ZMV5 832 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 TMC7Q7Z402 723 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 ZNF280BQ86YH2 543 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 BSNDQ8WZ55 320 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 TMEM169Q96HH4 297 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 BHMT2Q9H2M3 363 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 KANSL3Q9P2N6 904 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 DNAJB4Q9UDY4 337 aa28.06■■■□□ 2.08
PVT1-201ENST00000504719 TDRD15B5MCY1 1934 aaKnown RBP28.06■■■□□ 2.08
PVT1-201ENST00000504719 FSD2A1L4K1 749 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 BDP1A6H8Y1 2624 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 PP2D1A8MPX8 630 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 HIDE1A8MVS5 230 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 STX6O43752 255 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 SMAD4Q13485 552 aaKnown RBP28.05■■■□□ 2.08
PVT1-201ENST00000504719 KRT79Q5XKE5 535 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 TMEM173Q86WV6 379 aaPredicted RBP28.05■■■□□ 2.08
PVT1-201ENST00000504719 ZBTB8OSQ8IWT0 167 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 SPRYD3Q8NCJ5 442 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 IGSF21Q96ID5 467 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 PRIMPOLQ96LW4 560 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 GBP3Q9H0R5 595 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 RNF39Q9H2S5 420 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 PRMT7Q9NVM4 692 aaPredicted RBP28.05■■■□□ 2.08
PVT1-201ENST00000504719 MTMR6Q9Y217 621 aa28.05■■■□□ 2.08
PVT1-201ENST00000504719 B4GALT3O60512 393 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms