RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ARF4P18085 180 aaPredicted RBP15.78■□□□□ 0.12
HOXC9-202ENST00000504557 CYP11B2P19099 503 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 NRIP1P48552 1158 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 NOMO2Q5JPE7 1267 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 NOTUMQ6P988 496 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 URGCPQ8TCY9 931 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 KIFC3Q9BVG8 833 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 TLR9Q9NR96 1032 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 TBC1D13Q9NVG8 400 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 DNM3Q9UQ16 869 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 USP20Q9Y2K6 914 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 VCANP13611 3396 aa15.78■□□□□ 0.12
HOXC9-202ENST00000504557 PER2O15055 1255 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 OFD1O75665 1012 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 NPTXRO95502 500 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 POMCP01189 267 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 PDCP20941 246 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 ALDH7A1P49419 539 aaKnown RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 AFF1P51825 1210 aaKnown RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 BCAR1P56945 870 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 ERVFC1P60507 584 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 CEBPZQ03701 1054 aaKnown RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 CSPP1Q1MSJ5 1256 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 AGMOQ6ZNB7 445 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 PPP2R3CQ969Q6 453 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 FAM193BQ96PV7 902 aaPredicted RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 MMTAG2Q9BU76 263 aaKnown RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 TRAIPQ9BWF2 469 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 SPG21Q9NZD8 308 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 PUF60Q9UHX1 559 aaKnown RBP15.77■□□□□ 0.12
HOXC9-202ENST00000504557 IPPQ9Y573 584 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 STK24Q9Y6E0 443 aa15.77■□□□□ 0.12
HOXC9-202ENST00000504557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 CCDC169A6NNP5 214 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 EYA4O95677 639 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 SYT1P21579 422 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 MUTP22033 750 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 AXLP30530 894 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 NDUFV1P49821 464 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 KRT17Q04695 432 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 AMHR2Q16671 573 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 FAM173BQ6P4H8 233 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 BRAPQ7Z569 592 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 ZNF280BQ86YH2 543 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 IFNLR1Q8IU57 520 aaPredicted RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 SMG8Q8ND04 991 aaKnown RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 MRPS27Q92552 414 aaKnown RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 PABPC5Q96DU9 382 aaKnown RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 IFT74Q96LB3 600 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 TCF25Q9BQ70 676 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 NXF3Q9H4D5 531 aaKnown RBP15.76■□□□□ 0.11
HOXC9-202ENST00000504557 NRDE2Q9H7Z3 1164 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 TLE6Q9H808 572 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 DNAJB4Q9UDY4 337 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 PARP2Q9UGN5 583 aa15.76■□□□□ 0.11
HOXC9-202ENST00000504557 XIRP2A4UGR9 3374 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 NCOR1O75376 2440 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 TTLL13PA6NNM8 815 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 ZNF623O75123 536 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 HIP1RO75146 1068 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PRKCBP05771 671 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 IL9P15248 144 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 AKAP5P24588 427 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PPM1AP35813 382 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 MLH1P40692 756 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 RBM10P98175 930 aaKnown RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 POU5F1BQ06416 359 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 DLX2Q07687 328 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PTCRAQ6ISU1 281 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 TMC7Q7Z402 723 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 CABP7Q86V35 215 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 HSCBQ8IWL3 235 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 SLC39A11Q8N1S5 342 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 TMEM169Q96HH4 297 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 GAD1Q99259 594 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 C2orf40Q9H1Z8 148 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 PRMT7Q9NVM4 692 aaPredicted RBP15.75■□□□□ 0.11
HOXC9-202ENST00000504557 KLK14Q9P0G3 267 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 CLIC4Q9Y696 253 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms