RNA–Protein interactions for RNA: ENST00000496619.5

MKNK1-215, Transcript of MAP kinase interacting serine/threonine kinase 1, human

TSL 3

Gene MKNK1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKNK1-215	ENST00000496619	LRIT3	Q3SXY7	679 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	HAUS6	Q7Z4H7	955 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	FAM228A	Q86W67	206 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	DAW1	Q8N136	415 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM161B	Q8NDZ6	487 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	GOLGA5	Q8TBA6	731 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	RNPC3	Q96LT9	517 aa	Known RBP	11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	9e-7	■□□□□ 10.7
MKNK1-215	ENST00000496619	PRO3102	Q9H379	93 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	AGO3	Q9H9G7	860 aa	Known RBP	11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	MRPL44	Q9H9J2	332 aa	Known RBP	11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	GPRC5C	Q9NQ84	441 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	SERTAD1	Q9UHV2	236 aa		11.44	□□□□□ -0.58
MKNK1-215	ENST00000496619	CNTNAP2	Q9UHC6	1331 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TANC1	Q9C0D5	1861 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TOM1L1	O75674	476 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	PIGR	P01833	764 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	PRKCB	P05771	671 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	SMAD3	P84022	425 aa	Known RBP	11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	DSC3	Q14574	896 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	RAB30	Q15771	203 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	GPR153	Q6NV75	609 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	SLC27A1	Q6PCB7	646 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	C16orf59	Q7L2K0	433 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	DYM	Q7RTS9	669 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	NPAS4	Q8IUM7	802 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	KSR1	Q8IVT5	923 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM40	Q8WWA1	233 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TOP1MT	Q969P6	601 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	ACCS	Q96QU6	501 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	ADAM2	Q99965	735 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TRIM6	Q9C030	488 aa	Predicted RBP	11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	CCDC113	Q9H0I3	377 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	ZHX3	Q9H4I2	956 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	CDHR5	Q9HBB8	845 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	EXOC1	Q9NV70	894 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM161A	Q9NX61	479 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	KANSL3	Q9P2N6	904 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	LRFN2	Q9ULH4	789 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TNFSF13B	Q9Y275	285 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	INSL6	Q9Y581	213 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	PCDHB7	Q9Y5E2	793 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	CEP290	O15078	2479 aa		11.43	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM265	A0A087WTH1	108 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	RHOBTB3	O94955	611 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	LDHA	P00338	332 aa	Known RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	PRKCSH	P14314	528 aa	Predicted RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	AFM	P43652	599 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM132A	Q24JP5	1023 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	FAM26F	Q5R3K3	315 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	TWF2	Q6IBS0	349 aa	Known RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	OTOP2	Q7RTS6	562 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	MRPL10	Q7Z7H8	261 aa	Known RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	TRIML1	Q8N9V2	468 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	SPATA20	Q8TB22	786 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	TMEM174	Q8WUU8	243 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	SYAP1	Q96A49	352 aa	Predicted RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	ZBTB10	Q96DT7	871 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	RAD9A	Q99638	391 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	KIAA1586	Q9HCI6	787 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	STK39	Q9UEW8	545 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	TBX20	Q9UMR3	447 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	PIN4	Q9Y237	131 aa	Known RBP	11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	RWDD3	Q9Y3V2	267 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	LTBP2	Q14767	1821 aa		11.42	□□□□□ -0.58
MKNK1-215	ENST00000496619	SFI1	A8K8P3	1242 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ZBBX	A8MT70	800 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619		C9IYK1	514 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619		K7ENM7	598 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	SLC16A4	O15374	487 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	CLDN3	O15551	220 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	TSPAN1	O60635	241 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	RPN1	P04843	607 aa	Known RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ACR	P10323	421 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	MCF2	P10911	925 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ATP2A2	P16615	1042 aa	Known RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	HOXA11	P31270	313 aa	Predicted RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	WDR5	P61964	334 aa	Known RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	EHHADH	Q08426	723 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	RAD51AP2	Q09MP3	1159 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	DPYD	Q12882	1025 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	STIM1	Q13586	685 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	MYBPC2	Q14324	1141 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	SHH	Q15465	462 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	AMHR2	Q16671	573 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	COBLL1	Q53SF7	1204 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	L1TD1	Q5T7N2	865 aa	Known RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	NT5DC1	Q5TFE4	455 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ATF7IP2	Q5U623	682 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	MAP4K3	Q8IVH8	894 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ZNF507	Q8TCN5	953 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	LRRC15	Q8TF66	581 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	SMARCE1	Q969G3	411 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	SAMD11	Q96NU1	681 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ACO2	Q99798	780 aa	Known RBP	11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	ZBED2	Q9BTP6	218 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	STRA6	Q9BX79	667 aa		11.41	□□□□□ -0.58
MKNK1-215	ENST00000496619	MRPL9	Q9BYD2	267 aa	Known RBP	11.41	□□□□□ -0.58

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