RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ADRB2P07550 413 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 MMP3P08254 477 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 HOXD8P13378 290 aaPredicted RBP17.86■□□□□ 0.45
HLA-A-208ENST00000496081 INSRRP14616 1297 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 GARTP22102 1010 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 CTGFP29279 349 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 RGS2P41220 211 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 VAMP7P51809 220 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 CBWD6Q4V339 395 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 CBWD3Q5JTY5 395 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 ZNF484Q5JVG2 852 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 CBWD5Q5RIA9 395 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 CBWD2Q8IUF1 395 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 OR6J1Q8NGC5 347 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 PLEKHO2Q8TD55 490 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 PSPC1Q8WXF1 523 aaKnown RBP17.86■□□□□ 0.45
HLA-A-208ENST00000496081 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 TMEM134Q9H6X4 195 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 GCNT4Q9P109 453 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 USP20Q9Y2K6 914 aa17.86■□□□□ 0.45
HLA-A-208ENST00000496081 NDUFA10O95299 355 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 PIGRP01833 764 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 ZNF865P0CJ78 1059 aaPredicted RBP17.85■□□□□ 0.45
HLA-A-208ENST00000496081 CYP2C19P33261 490 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 LIG4P49917 911 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 MXD4Q14582 209 aaPredicted RBP17.85■□□□□ 0.45
HLA-A-208ENST00000496081 SNRNP35Q16560 246 aaKnown RBP17.85■□□□□ 0.45
HLA-A-208ENST00000496081 C1orf220Q5T0J3 134 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 KLHDC7AQ5VTJ3 777 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 OLFML2BQ68BL8 750 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 ACRBPQ8NEB7 543 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 ZBTB10Q96DT7 871 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 FBXL18Q96ME1 805 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 NHEJ1Q9H9Q4 299 aaPredicted RBP17.85■□□□□ 0.45
HLA-A-208ENST00000496081 SIX2Q9NPC8 291 aa17.85■□□□□ 0.45
HLA-A-208ENST00000496081 GOLGA6L9A6NEM1 432 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 C22orf31O95567 290 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 IGHA2P01877 340 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 UCHL3P15374 230 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 VEGFBP49765 207 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 EFCAB12Q6NXP0 572 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 APBA2Q99767 749 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 NUCKS1Q9H1E3 243 aaKnown RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 ZNF215Q9UL58 517 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 STYXL1Q9Y6J8 313 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 PHLPP2Q6ZVD8 1323 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 MGAMO43451 1857 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 H3BRB1 525 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 EDN1P05305 212 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 IGBP1P78318 339 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 PPP3CAQ08209 521 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 DGKDQ16760 1214 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 TRIM65Q6PJ69 517 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 GPD1LQ8N335 351 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 SYN2Q92777 582 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 TUT1Q9H6E5 874 aaKnown RBP17.84■□□□□ 0.45
HLA-A-208ENST00000496081 ARHGAP20Q9P2F6 1191 aa17.84■□□□□ 0.45
HLA-A-208ENST00000496081 EVPLQ92817 2033 aa17.83■□□□□ 0.45
HLA-A-208ENST00000496081 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 DYNC1LI2O43237 492 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 SRGAP2CP0DJJ0 459 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 EFNA5P52803 228 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 MYL7Q01449 175 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 CDCA2Q69YH5 1023 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 RHPN2Q8IUC4 686 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 CCDC170Q8IYT3 715 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 RNF149Q8NC42 400 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 ATRIPQ8WXE1 791 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 MFSD14AQ96MC6 490 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 FBXL5Q9UKA1 691 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 REXO2Q9Y3B8 237 aaKnown RBP17.83■□□□□ 0.44
HLA-A-208ENST00000496081 FHOD1Q9Y613 1164 aa17.83■□□□□ 0.44
HLA-A-208ENST00000496081 COL1A2P08123 1366 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 A6NJR5 290 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 KLRC1P26715 233 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 CLCN3P51790 818 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 SFMBT2Q5VUG0 894 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 HGSNATQ68CP4 663 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 GPIHBP1Q8IV16 184 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 METTL13Q8N6R0 699 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 PARD3BQ8TEW8 1205 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 HAPLN2Q9GZV7 340 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 CCDC113Q9H0I3 377 aa17.82■□□□□ 0.44
HLA-A-208ENST00000496081 MSCO60682 206 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 ALDH1A1P00352 501 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 GJB1P08034 283 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 CYLC1P35663 651 aaPredicted RBP17.81■□□□□ 0.44
HLA-A-208ENST00000496081 GCLMP48507 274 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 NOGQ13253 232 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 SLFN12LQ6IEE8 588 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 LMO3Q8TAP4 145 aa17.81■□□□□ 0.44
HLA-A-208ENST00000496081 ZNF592Q92610 1267 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms