RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ZZZ3Q8IYH5 903 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 OR10A5Q9H207 317 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 AURKAIP1Q9NWT8 199 aaPredicted RBP5.97□□□□□ -1.45
SMC4-224ENST00000494612 CEP72Q9P209 647 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 MAGEL2Q9UJ55 1249 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 THRAP3Q9Y2W1 955 aaKnown RBP5.97□□□□□ -1.45
SMC4-224ENST00000494612 ASB1Q9Y576 335 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 ELL2O00472 640 aaPredicted RBP5.96□□□□□ -1.46
SMC4-224ENST00000494612 PRPF6O94906 941 aaKnown RBP5.96□□□□□ -1.46
SMC4-224ENST00000494612 LPLP06858 475 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 ERVK-21P61565 698 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 PHC1P78364 1004 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 ADCY1Q08828 1119 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 MOGSQ13724 837 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 TUBA3CQ13748 450 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 LRRC32Q14392 662 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 TTF1Q15361 905 aaPredicted RBP5.96□□□□□ -1.46
SMC4-224ENST00000494612 PCBP2Q15366 365 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMC4-224ENST00000494612 TTC38Q5R3I4 469 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 SPTY2D1Q68D10 685 aaPredicted RBP5.96□□□□□ -1.46
SMC4-224ENST00000494612 CCDC62Q6P9F0 684 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 TUBA3EQ6PEY2 450 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 OTOP2Q7RTS6 562 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 LDLRAD3Q86YD5 345 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 CBARPQ8N350 705 aaPredicted RBP5.96□□□□□ -1.46
SMC4-224ENST00000494612 AASDHPPTQ9NRN7 309 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 WASHC2AQ641Q2 1341 aa5.96□□□□□ -1.46
SMC4-224ENST00000494612 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 PRSS38A1L453 326 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 CCND1P24385 295 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 KLF1Q13351 362 aaPredicted RBP5.95□□□□□ -1.46
SMC4-224ENST00000494612 MYBPC3Q14896 1274 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 SLFN12LQ6IEE8 588 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 TIGD7Q6NT04 549 aaPredicted RBP5.95□□□□□ -1.46
SMC4-224ENST00000494612 ESPNLQ6ZVH7 1005 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 MRGPRGQ86SM5 289 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 PHYKPLQ8IUZ5 450 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
SMC4-224ENST00000494612 WDR48Q8TAF3 677 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 LARP4BQ92615 738 aaKnown RBP5.95□□□□□ -1.46
SMC4-224ENST00000494612 FERMT2Q96AC1 680 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 VOPP1Q96AW1 172 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 EAF2Q96CJ1 260 aaPredicted RBP5.95□□□□□ -1.46
SMC4-224ENST00000494612 MAML3Q96JK9 1138 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 MMRN2Q9H8L6 949 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 KCNG1Q9UIX4 513 aa5.95□□□□□ -1.46
SMC4-224ENST00000494612 SLC26A4O43511 780 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 PRLP01236 227 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 MEOX1P50221 254 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 ALDH6A1Q02252 535 aaKnown RBP5.94□□□□□ -1.46
SMC4-224ENST00000494612 ADCY2Q08462 1091 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 FAPQ12884 760 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 ACAP2Q15057 778 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 ZBTB41Q5SVQ8 909 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 GPR158Q5T848 1215 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 PCSK4Q6UW60 755 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 ZBTB46Q86UZ6 589 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 SGMS1Q86VZ5 419 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 CXorf67Q86X51 503 aaPredicted RBP5.94□□□□□ -1.46
SMC4-224ENST00000494612 NME9Q86XW9 330 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 OR14K1Q8NGZ2 314 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 LMBR1Q8WVP7 490 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 HOOK2Q96ED9 719 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 FUBP3Q96I24 572 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMC4-224ENST00000494612 SLC2A13Q96QE2 648 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 QRSL1Q9H0R6 528 aaKnown RBP5.94□□□□□ -1.46
SMC4-224ENST00000494612 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 MKS1Q9NXB0 559 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 USP18Q9UMW8 372 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 PPP2R3BQ9Y5P8 575 aa5.94□□□□□ -1.46
SMC4-224ENST00000494612 XPOTO43592 962 aaKnown RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 MARCH6O60337 910 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 MAFO75444 373 aaPredicted RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 PCDH8O95206 1070 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 MAKP20794 623 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 GPR3P46089 330 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 RAB27AP51159 221 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 NEK2P51955 445 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 CCT2P78371 535 aaKnown RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 SRSF2Q01130 221 aaKnown RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 HHEXQ03014 270 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 ROM1Q03395 351 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 LRRC41Q15345 812 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 CSRP2Q16527 193 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 GRAMD4Q6IC98 578 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 PNMA8AQ86V59 439 aaPredicted RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 TMPRSS6Q8IU80 811 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 RTKN2Q8IZC4 609 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 THEMISQ8N1K5 641 aaPredicted RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 SHCBP1Q8NEM2 672 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 C1orf162Q8NEQ5 155 aaPredicted RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 E2F7Q96AV8 911 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 FAXDC2Q96IV6 333 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
SMC4-224ENST00000494612 GIT1Q9Y2X7 761 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 EID1Q9Y6B2 187 aa5.93□□□□□ -1.46
SMC4-224ENST00000494612 SHTN1A0MZ66 631 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms